RNA–Protein interactions for RNA: ENST00000318837.6

IGSF3-201, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene IGSF3, Length 3,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-201ENST00000318837 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
IGSF3-201ENST00000318837 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
IGSF3-201ENST00000318837 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
IGSF3-201ENST00000318837 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
IGSF3-201ENST00000318837 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
IGSF3-201ENST00000318837 HRCP23327 699 aa16.21■□□□□ 0.19
IGSF3-201ENST00000318837 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
IGSF3-201ENST00000318837 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
IGSF3-201ENST00000318837 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
IGSF3-201ENST00000318837 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
IGSF3-201ENST00000318837 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
IGSF3-201ENST00000318837 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.14
IGSF3-201ENST00000318837 ABCC9O60706 1549 aa15.95■□□□□ 0.14
IGSF3-201ENST00000318837 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
IGSF3-201ENST00000318837 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
IGSF3-201ENST00000318837 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
IGSF3-201ENST00000318837 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
IGSF3-201ENST00000318837 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
IGSF3-201ENST00000318837 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
IGSF3-201ENST00000318837 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
IGSF3-201ENST00000318837 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
IGSF3-201ENST00000318837 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
IGSF3-201ENST00000318837 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
IGSF3-201ENST00000318837 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
IGSF3-201ENST00000318837 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
IGSF3-201ENST00000318837 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
IGSF3-201ENST00000318837 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
IGSF3-201ENST00000318837 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
IGSF3-201ENST00000318837 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
IGSF3-201ENST00000318837 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
IGSF3-201ENST00000318837 APLP2Q06481 763 aa15.11■□□□□ 0.01
IGSF3-201ENST00000318837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
IGSF3-201ENST00000318837 NACADO15069 1562 aa15.07■□□□□ 0
IGSF3-201ENST00000318837 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
IGSF3-201ENST00000318837 ATP1B4Q9UN42 357 aaPredicted RBP14.93□□□□□ -0.02
IGSF3-201ENST00000318837 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
IGSF3-201ENST00000318837 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
IGSF3-201ENST00000318837 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
IGSF3-201ENST00000318837 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
IGSF3-201ENST00000318837 DIEXFQ68CQ4 756 aaKnown RBP14.88□□□□□ -0.03
IGSF3-201ENST00000318837 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
IGSF3-201ENST00000318837 WIZO95785 1651 aa14.86□□□□□ -0.03
IGSF3-201ENST00000318837 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
IGSF3-201ENST00000318837 ITGAEP38570 1179 aa14.8□□□□□ -0.04
IGSF3-201ENST00000318837 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
IGSF3-201ENST00000318837 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
IGSF3-201ENST00000318837 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
IGSF3-201ENST00000318837 YTHDC1Q96MU7 727 aaKnown RBP14.71□□□□□ -0.05
IGSF3-201ENST00000318837 SOGA1O94964 1423 aa14.7□□□□□ -0.06
IGSF3-201ENST00000318837 CEP162Q5TB80 1403 aa14.69□□□□□ -0.06
IGSF3-201ENST00000318837 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
IGSF3-201ENST00000318837 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
IGSF3-201ENST00000318837 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
IGSF3-201ENST00000318837 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
IGSF3-201ENST00000318837 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
IGSF3-201ENST00000318837 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
IGSF3-201ENST00000318837 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
IGSF3-201ENST00000318837 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
IGSF3-201ENST00000318837 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
IGSF3-201ENST00000318837 MIER1Q8N108 512 aa14.52□□□□□ -0.09
IGSF3-201ENST00000318837 EEA1Q15075 1411 aa14.48□□□□□ -0.09
IGSF3-201ENST00000318837 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
IGSF3-201ENST00000318837 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
IGSF3-201ENST00000318837 MYT1Q01538 1121 aa14.47□□□□□ -0.09
IGSF3-201ENST00000318837 CLIP1P30622 1438 aa14.46□□□□□ -0.09
IGSF3-201ENST00000318837 FAM50AQ14320 339 aaKnown RBP14.46□□□□□ -0.1
IGSF3-201ENST00000318837 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
IGSF3-201ENST00000318837 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
IGSF3-201ENST00000318837 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
IGSF3-201ENST00000318837 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
IGSF3-201ENST00000318837 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
IGSF3-201ENST00000318837 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.13
IGSF3-201ENST00000318837 FBLN2P98095 1184 aa14.25□□□□□ -0.13
IGSF3-201ENST00000318837 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
IGSF3-201ENST00000318837 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
IGSF3-201ENST00000318837 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
IGSF3-201ENST00000318837 KIF21BO75037 1637 aa14.2□□□□□ -0.14
IGSF3-201ENST00000318837 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
IGSF3-201ENST00000318837 CUX2O14529 1486 aa14.19□□□□□ -0.14
IGSF3-201ENST00000318837 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
IGSF3-201ENST00000318837 DHX57Q6P158 1386 aaKnown RBP14.14□□□□□ -0.15
IGSF3-201ENST00000318837 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
IGSF3-201ENST00000318837 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
IGSF3-201ENST00000318837 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
IGSF3-201ENST00000318837 CLSPNQ9HAW4 1339 aa14.12□□□□□ -0.15
IGSF3-201ENST00000318837 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
IGSF3-201ENST00000318837 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
IGSF3-201ENST00000318837 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
IGSF3-201ENST00000318837 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
IGSF3-201ENST00000318837 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
IGSF3-201ENST00000318837 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
IGSF3-201ENST00000318837 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
IGSF3-201ENST00000318837 BCANQ96GW7 911 aa14.02□□□□□ -0.16
IGSF3-201ENST00000318837 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
IGSF3-201ENST00000318837 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
IGSF3-201ENST00000318837 ZNF777Q9ULD5 760 aaPredicted RBP14.01□□□□□ -0.17
IGSF3-201ENST00000318837 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
IGSF3-201ENST00000318837 KCNH8Q96L42 1107 aa14□□□□□ -0.17
IGSF3-201ENST00000318837 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
IGSF3-201ENST00000318837 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms