RNA–Protein interactions for RNA: ENST00000359794.9

PFKM-203, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-203ENST00000359794 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
PFKM-203ENST00000359794 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
PFKM-203ENST00000359794 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
PFKM-203ENST00000359794 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
PFKM-203ENST00000359794 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
PFKM-203ENST00000359794 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PFKM-203ENST00000359794 NACADO15069 1562 aa15.82■□□□□ 0.12
PFKM-203ENST00000359794 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
PFKM-203ENST00000359794 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
PFKM-203ENST00000359794 HRCP23327 699 aa15.58■□□□□ 0.08
PFKM-203ENST00000359794 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
PFKM-203ENST00000359794 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
PFKM-203ENST00000359794 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
PFKM-203ENST00000359794 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
PFKM-203ENST00000359794 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
PFKM-203ENST00000359794 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
PFKM-203ENST00000359794 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
PFKM-203ENST00000359794 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
PFKM-203ENST00000359794 PELP1Q8IZL8 1130 aaKnown RBP15.02■□□□□ -0
PFKM-203ENST00000359794 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
PFKM-203ENST00000359794 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
PFKM-203ENST00000359794 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
PFKM-203ENST00000359794 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
PFKM-203ENST00000359794 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
PFKM-203ENST00000359794 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
PFKM-203ENST00000359794 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
PFKM-203ENST00000359794 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
PFKM-203ENST00000359794 WIZO95785 1651 aa14.8□□□□□ -0.04
PFKM-203ENST00000359794 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
PFKM-203ENST00000359794 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
PFKM-203ENST00000359794 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
PFKM-203ENST00000359794 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
PFKM-203ENST00000359794 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
PFKM-203ENST00000359794 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
PFKM-203ENST00000359794 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
PFKM-203ENST00000359794 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
PFKM-203ENST00000359794 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
PFKM-203ENST00000359794 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
PFKM-203ENST00000359794 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.08
PFKM-203ENST00000359794 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
PFKM-203ENST00000359794 MYT1Q01538 1121 aa14.42□□□□□ -0.1
PFKM-203ENST00000359794 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
PFKM-203ENST00000359794 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
PFKM-203ENST00000359794 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
PFKM-203ENST00000359794 NEUROD1Q13562 356 aa14.38□□□□□ -0.11
PFKM-203ENST00000359794 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
PFKM-203ENST00000359794 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
PFKM-203ENST00000359794 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
PFKM-203ENST00000359794 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
PFKM-203ENST00000359794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
PFKM-203ENST00000359794 CFTRP13569 1480 aa14.18□□□□□ -0.14
PFKM-203ENST00000359794 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
PFKM-203ENST00000359794 DIEXFQ68CQ4 756 aaKnown RBP14.17□□□□□ -0.14
PFKM-203ENST00000359794 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
PFKM-203ENST00000359794 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.16
PFKM-203ENST00000359794 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
PFKM-203ENST00000359794 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
PFKM-203ENST00000359794 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
PFKM-203ENST00000359794 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
PFKM-203ENST00000359794 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
PFKM-203ENST00000359794 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
PFKM-203ENST00000359794 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
PFKM-203ENST00000359794 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
PFKM-203ENST00000359794 NESP48681 1621 aa13.97□□□□□ -0.17
PFKM-203ENST00000359794 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.17
PFKM-203ENST00000359794 CUX1P39880 1505 aa13.95□□□□□ -0.18
PFKM-203ENST00000359794 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
PFKM-203ENST00000359794 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
PFKM-203ENST00000359794 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
PFKM-203ENST00000359794 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
PFKM-203ENST00000359794 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
PFKM-203ENST00000359794 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
PFKM-203ENST00000359794 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
PFKM-203ENST00000359794 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
PFKM-203ENST00000359794 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
PFKM-203ENST00000359794 MIER1Q8N108 512 aa13.8□□□□□ -0.2
PFKM-203ENST00000359794 WDR62O43379 1518 aa13.79□□□□□ -0.2
PFKM-203ENST00000359794 EEA1Q15075 1411 aa13.77□□□□□ -0.21
PFKM-203ENST00000359794 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
PFKM-203ENST00000359794 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
PFKM-203ENST00000359794 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
PFKM-203ENST00000359794 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
PFKM-203ENST00000359794 SOGA1O94964 1423 aa13.71□□□□□ -0.21
PFKM-203ENST00000359794 KIF21BO75037 1637 aa13.71□□□□□ -0.22
PFKM-203ENST00000359794 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
PFKM-203ENST00000359794 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
PFKM-203ENST00000359794 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
PFKM-203ENST00000359794 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
PFKM-203ENST00000359794 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
PFKM-203ENST00000359794 CUX2O14529 1486 aa13.63□□□□□ -0.23
PFKM-203ENST00000359794 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
PFKM-203ENST00000359794 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
PFKM-203ENST00000359794 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
PFKM-203ENST00000359794 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
PFKM-203ENST00000359794 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
PFKM-203ENST00000359794 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
PFKM-203ENST00000359794 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
PFKM-203ENST00000359794 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
PFKM-203ENST00000359794 CUL7Q14999 1698 aa13.6□□□□□ -0.23
PFKM-203ENST00000359794 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms