RNA–Protein interactions for RNA: ENST00000347300.6

IFT122-202, Transcript of intraflagellar transport 122, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IFT122, Length 3,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT122-202ENST00000347300 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
IFT122-202ENST00000347300 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
IFT122-202ENST00000347300 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
IFT122-202ENST00000347300 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
IFT122-202ENST00000347300 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
IFT122-202ENST00000347300 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
IFT122-202ENST00000347300 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
IFT122-202ENST00000347300 HRCP23327 699 aa15.67■□□□□ 0.1
IFT122-202ENST00000347300 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
IFT122-202ENST00000347300 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
IFT122-202ENST00000347300 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
IFT122-202ENST00000347300 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
IFT122-202ENST00000347300 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
IFT122-202ENST00000347300 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
IFT122-202ENST00000347300 ABCC9O60706 1549 aa15.29■□□□□ 0.04
IFT122-202ENST00000347300 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
IFT122-202ENST00000347300 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
IFT122-202ENST00000347300 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
IFT122-202ENST00000347300 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
IFT122-202ENST00000347300 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
IFT122-202ENST00000347300 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
IFT122-202ENST00000347300 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
IFT122-202ENST00000347300 NACADO15069 1562 aa14.95□□□□□ -0.02
IFT122-202ENST00000347300 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
IFT122-202ENST00000347300 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
IFT122-202ENST00000347300 WIZO95785 1651 aa14.78□□□□□ -0.04
IFT122-202ENST00000347300 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
IFT122-202ENST00000347300 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
IFT122-202ENST00000347300 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
IFT122-202ENST00000347300 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
IFT122-202ENST00000347300 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
IFT122-202ENST00000347300 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
IFT122-202ENST00000347300 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
IFT122-202ENST00000347300 ZEB1P37275 1124 aaPredicted RBP14.5□□□□□ -0.09
IFT122-202ENST00000347300 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
IFT122-202ENST00000347300 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
IFT122-202ENST00000347300 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
IFT122-202ENST00000347300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
IFT122-202ENST00000347300 SOGA1O94964 1423 aa14.43□□□□□ -0.1
IFT122-202ENST00000347300 UNC13AQ9UPW8 1703 aa14.42□□□□□ -0.1
IFT122-202ENST00000347300 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
IFT122-202ENST00000347300 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
IFT122-202ENST00000347300 CCER1Q8TC90 406 aaPredicted RBP14.4□□□□□ -0.1
IFT122-202ENST00000347300 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
IFT122-202ENST00000347300 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
IFT122-202ENST00000347300 EIF4G1Q04637 1599 aaKnown RBP14.36□□□□□ -0.11
IFT122-202ENST00000347300 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
IFT122-202ENST00000347300 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
IFT122-202ENST00000347300 BICRAQ9NZM4 1560 aa14.32□□□□□ -0.12
IFT122-202ENST00000347300 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
IFT122-202ENST00000347300 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
IFT122-202ENST00000347300 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
IFT122-202ENST00000347300 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
IFT122-202ENST00000347300 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
IFT122-202ENST00000347300 EEA1Q15075 1411 aa14.19□□□□□ -0.14
IFT122-202ENST00000347300 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
IFT122-202ENST00000347300 GOLGA3Q08378 1498 aa14.16□□□□□ -0.14
IFT122-202ENST00000347300 APLP2Q06481 763 aa14.16□□□□□ -0.14
IFT122-202ENST00000347300 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
IFT122-202ENST00000347300 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
IFT122-202ENST00000347300 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
IFT122-202ENST00000347300 CLIP1P30622 1438 aa14.08□□□□□ -0.16
IFT122-202ENST00000347300 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
IFT122-202ENST00000347300 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
IFT122-202ENST00000347300 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.17
IFT122-202ENST00000347300 MYT1Q01538 1121 aa13.96□□□□□ -0.18
IFT122-202ENST00000347300 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.18
IFT122-202ENST00000347300 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
IFT122-202ENST00000347300 KIF21BO75037 1637 aa13.92□□□□□ -0.18
IFT122-202ENST00000347300 MIER1Q8N108 512 aa13.92□□□□□ -0.18
IFT122-202ENST00000347300 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
IFT122-202ENST00000347300 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
IFT122-202ENST00000347300 ITGAEP38570 1179 aa13.89□□□□□ -0.19
IFT122-202ENST00000347300 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
IFT122-202ENST00000347300 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
IFT122-202ENST00000347300 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
IFT122-202ENST00000347300 ATP1B4Q9UN42 357 aaPredicted RBP13.83□□□□□ -0.19
IFT122-202ENST00000347300 CUX1P39880 1505 aa13.83□□□□□ -0.2
IFT122-202ENST00000347300 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
IFT122-202ENST00000347300 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
IFT122-202ENST00000347300 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
IFT122-202ENST00000347300 CFTRP13569 1480 aa13.79□□□□□ -0.2
IFT122-202ENST00000347300 BIVM-ERCC5R4GMW8 1640 aa13.76□□□□□ -0.21
IFT122-202ENST00000347300 CUX2O14529 1486 aa13.76□□□□□ -0.21
IFT122-202ENST00000347300 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
IFT122-202ENST00000347300 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
IFT122-202ENST00000347300 ERICH3Q5RHP9 1530 aa13.72□□□□□ -0.21
IFT122-202ENST00000347300 IGF1RP08069 1367 aa13.71□□□□□ -0.21
IFT122-202ENST00000347300 CARMIL1Q5VZK9 1371 aa13.69□□□□□ -0.22
IFT122-202ENST00000347300 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
IFT122-202ENST00000347300 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
IFT122-202ENST00000347300 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
IFT122-202ENST00000347300 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
IFT122-202ENST00000347300 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
IFT122-202ENST00000347300 CCNB3Q8WWL7 1395 aa13.63□□□□□ -0.23
IFT122-202ENST00000347300 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
IFT122-202ENST00000347300 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
IFT122-202ENST00000347300 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
IFT122-202ENST00000347300 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
IFT122-202ENST00000347300 NESP48681 1621 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms