RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
CTPS2-202ENST00000380241 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
CTPS2-202ENST00000380241 HRCP23327 699 aa16.03■□□□□ 0.16
CTPS2-202ENST00000380241 MYT1Q01538 1121 aa15.64■□□□□ 0.09
CTPS2-202ENST00000380241 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
CTPS2-202ENST00000380241 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.07
CTPS2-202ENST00000380241 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
CTPS2-202ENST00000380241 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
CTPS2-202ENST00000380241 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
CTPS2-202ENST00000380241 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
CTPS2-202ENST00000380241 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
CTPS2-202ENST00000380241 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
CTPS2-202ENST00000380241 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
CTPS2-202ENST00000380241 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
CTPS2-202ENST00000380241 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
CTPS2-202ENST00000380241 PRKCSHP14314 528 aaPredicted RBP14.92□□□□□ -0.02
CTPS2-202ENST00000380241 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
CTPS2-202ENST00000380241 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
CTPS2-202ENST00000380241 NEUROD1Q13562 356 aa14.77□□□□□ -0.05
CTPS2-202ENST00000380241 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
CTPS2-202ENST00000380241 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
CTPS2-202ENST00000380241 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
CTPS2-202ENST00000380241 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
CTPS2-202ENST00000380241 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.09
CTPS2-202ENST00000380241 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
CTPS2-202ENST00000380241 ABCC9O60706 1549 aa14.43□□□□□ -0.1
CTPS2-202ENST00000380241 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
CTPS2-202ENST00000380241 CCER1Q8TC90 406 aaPredicted RBP14.31□□□□□ -0.12
CTPS2-202ENST00000380241 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
CTPS2-202ENST00000380241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
CTPS2-202ENST00000380241 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
CTPS2-202ENST00000380241 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
CTPS2-202ENST00000380241 ANP32EQ9BTT0 268 aa14.23□□□□□ -0.13
CTPS2-202ENST00000380241 APLP2Q06481 763 aa14.23□□□□□ -0.13
CTPS2-202ENST00000380241 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
CTPS2-202ENST00000380241 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
CTPS2-202ENST00000380241 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
CTPS2-202ENST00000380241 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.16
CTPS2-202ENST00000380241 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
CTPS2-202ENST00000380241 MIER1Q8N108 512 aa14.01□□□□□ -0.17
CTPS2-202ENST00000380241 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
CTPS2-202ENST00000380241 SUPT16HQ9Y5B9 1047 aaKnown RBP13.97□□□□□ -0.17
CTPS2-202ENST00000380241 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
CTPS2-202ENST00000380241 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
CTPS2-202ENST00000380241 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
CTPS2-202ENST00000380241 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
CTPS2-202ENST00000380241 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
CTPS2-202ENST00000380241 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
CTPS2-202ENST00000380241 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTPS2-202ENST00000380241 BCANQ96GW7 911 aa13.62□□□□□ -0.23
CTPS2-202ENST00000380241 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
CTPS2-202ENST00000380241 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
CTPS2-202ENST00000380241 FKBP8Q14318 412 aa13.55□□□□□ -0.24
CTPS2-202ENST00000380241 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
CTPS2-202ENST00000380241 NEFLP07196 543 aa13.54□□□□□ -0.24
CTPS2-202ENST00000380241 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
CTPS2-202ENST00000380241 MSH5O43196 834 aa13.49□□□□□ -0.25
CTPS2-202ENST00000380241 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
CTPS2-202ENST00000380241 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
CTPS2-202ENST00000380241 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
CTPS2-202ENST00000380241 ANO8Q9HCE9 1232 aaPredicted RBP13.43□□□□□ -0.26
CTPS2-202ENST00000380241 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
CTPS2-202ENST00000380241 ITGAEP38570 1179 aa13.39□□□□□ -0.27
CTPS2-202ENST00000380241 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
CTPS2-202ENST00000380241 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
CTPS2-202ENST00000380241 NACADO15069 1562 aa13.37□□□□□ -0.27
CTPS2-202ENST00000380241 PODXL2Q9NZ53 605 aa13.36□□□□□ -0.27
CTPS2-202ENST00000380241 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
CTPS2-202ENST00000380241 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
CTPS2-202ENST00000380241 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
CTPS2-202ENST00000380241 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
CTPS2-202ENST00000380241 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
CTPS2-202ENST00000380241 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
CTPS2-202ENST00000380241 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
CTPS2-202ENST00000380241 TRIM52Q96A61 297 aa13.19□□□□□ -0.3
CTPS2-202ENST00000380241 EEA1Q15075 1411 aa13.19□□□□□ -0.3
CTPS2-202ENST00000380241 NBR1Q14596 966 aa13.19□□□□□ -0.3
CTPS2-202ENST00000380241 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
CTPS2-202ENST00000380241 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
CTPS2-202ENST00000380241 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
CTPS2-202ENST00000380241 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
CTPS2-202ENST00000380241 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
CTPS2-202ENST00000380241 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
CTPS2-202ENST00000380241 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
CTPS2-202ENST00000380241 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
CTPS2-202ENST00000380241 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
CTPS2-202ENST00000380241 SOGA1O94964 1423 aa13.14□□□□□ -0.31
CTPS2-202ENST00000380241 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
CTPS2-202ENST00000380241 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
CTPS2-202ENST00000380241 ANP32CO43423 234 aa13.1□□□□□ -0.31
CTPS2-202ENST00000380241 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
CTPS2-202ENST00000380241 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
CTPS2-202ENST00000380241 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.09□□□□□ -0.31
CTPS2-202ENST00000380241 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
CTPS2-202ENST00000380241 CLIP1P30622 1438 aa13.08□□□□□ -0.32
CTPS2-202ENST00000380241 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
CTPS2-202ENST00000380241 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
CTPS2-202ENST00000380241 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
CTPS2-202ENST00000380241 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
CTPS2-202ENST00000380241 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms