Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.67■□□□□ 0.74
IFT43Q96FT9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT43Q96FT9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 ECEL1P3-201ENST00000427961 737 ntBASIC19.66■□□□□ 0.74
IFT43Q96FT9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 AF186192.3-201ENST00000583427 947 ntBASIC19.66■□□□□ 0.74
IFT43Q96FT9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 HCG11-201ENST00000411553 5696 ntBASIC19.66■□□□□ 0.74
IFT43Q96FT9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT43Q96FT9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.66■□□□□ 0.74
IFT43Q96FT9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 HTR7P1-201ENST00000538670 1336 ntBASIC19.65■□□□□ 0.74
IFT43Q96FT9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.65■□□□□ 0.74
IFT43Q96FT9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms