Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST4Q8NFU0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 AC007322.4-201ENST00000509611 723 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 MFSD11-216ENST00000590393 1141 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 AC100791.3-201ENST00000617619 330 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 AC105020.6-201ENST00000621523 1217 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 AC013268.1-206ENST00000638368 961 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 AC112229.1-201ENST00000639295 961 ntBASIC16.48■□□□□ 0.23
BEST4Q8NFU0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BEST4Q8NFU0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 KRT18P61-201ENST00000585825 1298 ntBASIC16.47■□□□□ 0.23
BEST4Q8NFU0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST4Q8NFU0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 Z98044.1-201ENST00000632503 1764 ntBASIC16.46■□□□□ 0.23
BEST4Q8NFU0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST4Q8NFU0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms