Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.09□□□□□ -0.158e-16■■□□□ 13.7
SUB1P53999 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.788e-16■■□□□ 13.7
SUB1P53999 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 515.89■□□□□ 0.132e-8■■□□□ 13.7
SUB1P53999 ESYT2-203ENST00000435514 2090 ntTSL 210.57□□□□□ -0.722e-8■■□□□ 13.7
SUB1P53999 LTBP4-223ENST00000598717 811 ntTSL 515.16■□□□□ 0.025e-12■■□□□ 13.7
SUB1P53999 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC10.12□□□□□ -0.795e-30■■□□□ 13.7
SUB1P53999 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.165e-9■■□□□ 13.7
SUB1P53999 ARPC3-203ENST00000467622 1098 ntTSL 57.2□□□□□ -1.265e-9■■□□□ 13.7
SUB1P53999 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.08□□□□□ -1.765e-9■■□□□ 13.7
SUB1P53999 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.057e-7■■□□□ 13.7
SUB1P53999 ARVCF-211ENST00000495096 2549 ntTSL 215.43■□□□□ 0.063e-9■■□□□ 13.6
SUB1P53999 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.33e-9■■□□□ 13.6
SUB1P53999 AURKB-213ENST00000584972 739 ntTSL 38.28□□□□□ -1.081e-6■■□□□ 13.6
SUB1P53999 ATP6AP1-203ENST00000429585 769 ntTSL 518.38■□□□□ 0.537e-14■■□□□ 13.6
SUB1P53999 ATP6AP1-204ENST00000439372 604 ntTSL 417.97■□□□□ 0.477e-14■■□□□ 13.6
SUB1P53999 ATP6AP1-205ENST00000446552 571 ntTSL 417.69■□□□□ 0.427e-14■■□□□ 13.6
SUB1P53999 ATP6AP1-206ENST00000449556 720 ntTSL 517.06■□□□□ 0.327e-14■■□□□ 13.6
SUB1P53999 ATP6AP1-202ENST00000422890 867 ntTSL 514.68□□□□□ -0.067e-14■■□□□ 13.6
SUB1P53999 SRSF2-206ENST00000582449 1518 ntTSL 213.21□□□□□ -0.291e-20■■□□□ 13.6
SUB1P53999 SRSF2-210ENST00000589919 595 ntTSL 25.04□□□□□ -1.61e-20■■□□□ 13.6
SUB1P53999 SRSF2-209ENST00000586778 1001 ntTSL 22.54□□□□□ -21e-20■■□□□ 13.6
SUB1P53999 RHOT2-225ENST00000570092 674 ntTSL 318.78■□□□□ 0.67e-7■■□□□ 13.6
SUB1P53999 RHOT2-209ENST00000563134 736 ntTSL 218.47■□□□□ 0.557e-7■■□□□ 13.6
SUB1P53999 RHOT2-204ENST00000561983 1044 ntTSL 518.34■□□□□ 0.537e-7■■□□□ 13.6
SUB1P53999 RHOT2-216ENST00000567017 1094 ntTSL 516.74■□□□□ 0.277e-7■■□□□ 13.6
SUB1P53999 RHOT2-207ENST00000562708 672 ntTSL 516.74■□□□□ 0.277e-7■■□□□ 13.6
SUB1P53999 RHOT2-214ENST00000566214 683 ntTSL 516.58■□□□□ 0.247e-7■■□□□ 13.6
SUB1P53999 RHOT2-226ENST00000570280 708 ntTSL 314.88□□□□□ -0.037e-7■■□□□ 13.6
SUB1P53999 RHOT2-205ENST00000562333 1052 ntTSL 514.85□□□□□ -0.037e-7■■□□□ 13.6
SUB1P53999 RHOT2-210ENST00000563637 993 ntTSL 514.17□□□□□ -0.147e-7■■□□□ 13.6
SUB1P53999 RHOT2-211ENST00000563776 923 ntTSL 313.14□□□□□ -0.317e-7■■□□□ 13.6
SUB1P53999 RHOT2-206ENST00000562598 612 ntTSL 311.74□□□□□ -0.537e-7■■□□□ 13.6
SUB1P53999 RHOT2-203ENST00000561929 625 ntTSL 210.17□□□□□ -0.787e-7■■□□□ 13.6
SUB1P53999 STMN1-205ENST00000446334 665 ntTSL 24.53□□□□□ -1.688e-17■■□□□ 13.6
SUB1P53999 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.591e-8■■□□□ 13.6
SUB1P53999 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.421e-8■■□□□ 13.6
SUB1P53999 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.84■□□□□ 0.291e-8■■□□□ 13.6
SUB1P53999 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.43■□□□□ 0.221e-8■■□□□ 13.6
SUB1P53999 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.53□□□□□ -0.241e-8■■□□□ 13.6
SUB1P53999 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.17□□□□□ -0.461e-8■■□□□ 13.6
SUB1P53999 GNB2-211ENST00000469287 1702 ntTSL 212.09□□□□□ -0.471e-8■■□□□ 13.6
SUB1P53999 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.481e-8■■□□□ 13.6
SUB1P53999 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.196e-7■■□□□ 13.6
SUB1P53999 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.346e-7■■□□□ 13.6
SUB1P53999 EIF4A1-221ENST00000581841 621 ntTSL 27.92□□□□□ -1.144e-6■■□□□ 13.6
SUB1P53999 EIF4A1-227ENST00000583217 599 ntTSL 26.92□□□□□ -1.34e-6■■□□□ 13.6
SUB1P53999 EIF4A1-210ENST00000578569 583 ntTSL 25.42□□□□□ -1.544e-6■■□□□ 13.6
SUB1P53999 EIF4A1-220ENST00000581808 205 ntTSL 32.77□□□□□ -1.974e-6■■□□□ 13.6
SUB1P53999 COPG1-210ENST00000515725 3231 ntTSL 27.24□□□□□ -1.251e-7■■□□□ 13.6
SUB1P53999 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.331e-7■■□□□ 13.6
SUB1P53999 RPL8-210ENST00000531767 570 ntTSL 511.76□□□□□ -0.533e-43■■□□□ 13.6
SUB1P53999 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.4□□□□□ -1.391e-8■■□□□ 13.6
SUB1P53999 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.22□□□□□ -1.571e-8■■□□□ 13.6
SUB1P53999 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.91□□□□□ -0.344e-9■■□□□ 13.6
SUB1P53999 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.45□□□□□ -0.424e-9■■□□□ 13.6
SUB1P53999 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.494e-9■■□□□ 13.6
SUB1P53999 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.54e-9■■□□□ 13.6
SUB1P53999 PRPF3-207ENST00000496202 1082 ntTSL 1 (best)7.51□□□□□ -1.214e-9■■□□□ 13.6
SUB1P53999 MSI2-212ENST00000579590 452 ntTSL 53.76□□□□□ -1.814e-9■■□□□ 13.6
SUB1P53999 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.5□□□□□ -1.055e-7■■□□□ 13.5
SUB1P53999 EPB41-208ENST00000460378 5212 ntTSL 1 (best)8.44□□□□□ -1.065e-7■■□□□ 13.5
SUB1P53999 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.075e-7■■□□□ 13.5
SUB1P53999 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.295e-7■■□□□ 13.5
SUB1P53999 FLNA-217ENST00000498411 368 ntTSL 312.14□□□□□ -0.475e-7■■□□□ 13.5
SUB1P53999 NDUFA4-203ENST00000470761 502 ntTSL 411.21□□□□□ -0.612e-8■■□□□ 13.5
SUB1P53999 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.542e-8■■□□□ 13.5
SUB1P53999 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-12■■□□□ 13.5
SUB1P53999 RPL5-201ENST00000315741 681 ntTSL 59.05□□□□□ -0.964e-12■■□□□ 13.5
SUB1P53999 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.284e-8■■□□□ 13.5
SUB1P53999 LDHAP7-201ENST00000398295 965 ntBASIC7.61□□□□□ -1.198e-11■■□□□ 13.5
SUB1P53999 RPL8-203ENST00000525232 1007 ntTSL 1 (best)15.16■□□□□ 0.021e-43■■□□□ 13.5
SUB1P53999 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC10.34□□□□□ -0.753e-6■■□□□ 13.5
SUB1P53999 RPL11-203ENST00000458455 721 ntTSL 1 (best)9.07□□□□□ -0.969e-74■■□□□ 13.5
SUB1P53999 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.249e-74■■□□□ 13.5
SUB1P53999 RPL11-205ENST00000482370 879 ntTSL 1 (best)6.7□□□□□ -1.349e-74■■□□□ 13.5
SUB1P53999 RPL11-202ENST00000443624 994 ntTSL 26.22□□□□□ -1.419e-74■■□□□ 13.5
SUB1P53999 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC9.86□□□□□ -0.832e-6■■□□□ 13.4
SUB1P53999 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.132e-6■■□□□ 13.4
SUB1P53999 RPL14-204ENST00000435633 966 ntTSL 215.8■□□□□ 0.122e-78■■□□□ 13.4
SUB1P53999 RPL14-206ENST00000465280 616 ntTSL 212.44□□□□□ -0.422e-78■■□□□ 13.4
SUB1P53999 RPL14-209ENST00000481798 604 ntTSL 35.24□□□□□ -1.572e-78■■□□□ 13.4
SUB1P53999 VPS51-212ENST00000533656 923 ntTSL 216.98■□□□□ 0.315e-7■■□□□ 13.4
SUB1P53999 FDXR-208ENST00000578473 2482 ntTSL 1 (best)16.91■□□□□ 0.35e-7■■□□□ 13.4
SUB1P53999 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.215e-7■■□□□ 13.4
SUB1P53999 VPS51-211ENST00000533487 600 ntTSL 316.17■□□□□ 0.185e-7■■□□□ 13.4
SUB1P53999 VPS51-207ENST00000529180 1027 ntAPPRIS ALT2 TSL 316.13■□□□□ 0.175e-7■■□□□ 13.4
SUB1P53999 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.12■□□□□ 0.175e-7■■□□□ 13.4
SUB1P53999 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.04■□□□□ 0.165e-7■■□□□ 13.4
SUB1P53999 KMT2D-203ENST00000547610 636 ntTSL 516.01■□□□□ 0.155e-7■■□□□ 13.4
SUB1P53999 FDXR-206ENST00000577509 1912 ntTSL 215.95■□□□□ 0.145e-7■■□□□ 13.4
SUB1P53999 VPS51-214ENST00000534124 1089 ntTSL 515.83■□□□□ 0.125e-7■■□□□ 13.4
SUB1P53999 FDXR-218ENST00000583881 1561 ntTSL 215.6■□□□□ 0.095e-7■■□□□ 13.4
SUB1P53999 FDXR-209ENST00000579482 2157 ntTSL 215.49■□□□□ 0.075e-7■■□□□ 13.4
SUB1P53999 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.27■□□□□ 0.045e-7■■□□□ 13.4
SUB1P53999 VPS51-209ENST00000530773 837 ntTSL 515.27■□□□□ 0.045e-7■■□□□ 13.4
SUB1P53999 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.025e-7■■□□□ 13.4
SUB1P53999 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.76□□□□□ -0.055e-7■■□□□ 13.4
SUB1P53999 PTOV1-211ENST00000598632 1073 ntTSL 214.72□□□□□ -0.055e-7■■□□□ 13.4
SUB1P53999 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.6□□□□□ -0.075e-7■■□□□ 13.4
SUB1P53999 VPS51-206ENST00000528588 723 ntTSL 314.59□□□□□ -0.075e-7■■□□□ 13.4
Retrieved 100 of 11,644 protein–RNA pairs in 212.9 ms