Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.334e-8■■□□□ 13.3
NCBP2P52298 DOCK4-212ENST00000476846 3218 ntTSL 513.83□□□□□ -0.25e-8■■□□□ 13.3
NCBP2P52298 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.275e-8■■□□□ 13.3
NCBP2P52298 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.665e-8■■□□□ 13.3
NCBP2P52298 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.013e-7■■□□□ 13.3
NCBP2P52298 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.288e-11■■□□□ 13.3
NCBP2P52298 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.218e-11■■□□□ 13.3
NCBP2P52298 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.653e-12■■□□□ 13.3
NCBP2P52298 UBE2F-206ENST00000416292 552 ntTSL 218.84■□□□□ 0.613e-12■■□□□ 13.3
NCBP2P52298 UBE2F-212ENST00000439338 873 ntTSL 518.84■□□□□ 0.613e-12■■□□□ 13.3
NCBP2P52298 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.61■□□□□ 0.573e-12■■□□□ 13.3
NCBP2P52298 UBE2F-217ENST00000448502 561 ntTSL 418.27■□□□□ 0.523e-12■■□□□ 13.3
NCBP2P52298 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.08■□□□□ 0.483e-12■■□□□ 13.3
NCBP2P52298 UBE2F-209ENST00000433568 574 ntTSL 418.08■□□□□ 0.483e-12■■□□□ 13.3
NCBP2P52298 UBE2F-207ENST00000417231 984 ntTSL 518.07■□□□□ 0.483e-12■■□□□ 13.3
NCBP2P52298 UBE2F-215ENST00000441728 1242 ntTSL 217.94■□□□□ 0.463e-12■■□□□ 13.3
NCBP2P52298 UBE2F-218ENST00000454786 1292 ntTSL 515.46■□□□□ 0.073e-12■■□□□ 13.3
NCBP2P52298 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.051e-6■■□□□ 13.3
NCBP2P52298 UBE2F-214ENST00000440223 830 ntTSL 315.05■□□□□ -03e-12■■□□□ 13.3
NCBP2P52298 HPS1-207ENST00000465957 922 ntTSL 214.92□□□□□ -0.021e-6■■□□□ 13.3
NCBP2P52298 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.46□□□□□ -0.093e-12■■□□□ 13.3
NCBP2P52298 HPS1-214ENST00000498219 845 ntTSL 513.58□□□□□ -0.241e-6■■□□□ 13.3
NCBP2P52298 UBE2F-219ENST00000455999 760 ntTSL 513.23□□□□□ -0.293e-12■■□□□ 13.3
NCBP2P52298 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.311e-6■■□□□ 13.3
NCBP2P52298 UBE2F-216ENST00000445676 831 ntTSL 313.08□□□□□ -0.323e-12■■□□□ 13.3
NCBP2P52298 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.421e-6■■□□□ 13.3
NCBP2P52298 HPS1-212ENST00000480020 795 ntTSL 511.5□□□□□ -0.571e-6■■□□□ 13.3
NCBP2P52298 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-6■■□□□ 13.3
NCBP2P52298 HPS1-208ENST00000467246 2791 ntTSL 1 (best)10.82□□□□□ -0.681e-6■■□□□ 13.3
NCBP2P52298 UBE2F-213ENST00000439780 571 ntTSL 59.68□□□□□ -0.863e-12■■□□□ 13.3
NCBP2P52298 UBE2F-208ENST00000433241 803 ntTSL 29.26□□□□□ -0.933e-12■■□□□ 13.3
NCBP2P52298 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.6□□□□□ -1.513e-12■■□□□ 13.3
NCBP2P52298 AFF1-209ENST00000511996 480 ntTSL 213.16□□□□□ -0.35e-6■■□□□ 13.2
NCBP2P52298 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.295e-7■■□□□ 13.2
NCBP2P52298 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.175e-7■■□□□ 13.2
NCBP2P52298 NFATC3-209ENST00000561714 792 ntTSL 319.99■□□□□ 0.799e-8■■□□□ 13.2
NCBP2P52298 NFATC3-219ENST00000568466 737 ntTSL 218.38■□□□□ 0.539e-8■■□□□ 13.2
NCBP2P52298 FBXL6-208ENST00000530142 3108 ntTSL 1 (best)15.83■□□□□ 0.125e-7■■□□□ 13.2
NCBP2P52298 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.59■□□□□ 0.099e-8■■□□□ 13.2
NCBP2P52298 NFATC3-217ENST00000566893 715 ntTSL 211.57□□□□□ -0.569e-8■■□□□ 13.2
NCBP2P52298 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)9.34□□□□□ -0.919e-8■■□□□ 13.2
NCBP2P52298 NFATC3-208ENST00000553077 3870 ntTSL 29.03□□□□□ -0.969e-8■■□□□ 13.2
NCBP2P52298 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)6.99□□□□□ -1.299e-8■■□□□ 13.2
NCBP2P52298 NFATC3-207ENST00000549350 3588 ntTSL 26.47□□□□□ -1.379e-8■■□□□ 13.2
NCBP2P52298 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)6.06□□□□□ -1.449e-8■■□□□ 13.2
NCBP2P52298 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.3□□□□□ -1.889e-8■■□□□ 13.2
NCBP2P52298 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.122e-6■■□□□ 13.2
NCBP2P52298 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC11.43□□□□□ -0.582e-6■■□□□ 13.2
NCBP2P52298 CENPO-205ENST00000473476 459 ntTSL 45.56□□□□□ -1.522e-6■■□□□ 13.2
NCBP2P52298 MSH2-203ENST00000454849 560 ntTSL 422.88■■□□□ 1.253e-9■■□□□ 13.2
NCBP2P52298 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.16□□□□□ -0.33e-9■■□□□ 13.2
NCBP2P52298 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.553e-9■■□□□ 13.2
NCBP2P52298 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.24□□□□□ -0.933e-9■■□□□ 13.2
NCBP2P52298 STAG3L5P-PVRIG2P-PILRB-203ENST00000470714 868 ntTSL 315.71■□□□□ 0.111e-11■■□□□ 13.2
NCBP2P52298 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.65□□□□□ -0.221e-11■■□□□ 13.2
NCBP2P52298 STAG3L5P-PVRIG2P-PILRB-205ENST00000483329 819 ntTSL 511.19□□□□□ -0.621e-11■■□□□ 13.2
NCBP2P52298 STAG3L5P-201ENST00000414292 517 ntTSL 210.71□□□□□ -0.691e-11■■□□□ 13.2
NCBP2P52298 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC10.15□□□□□ -0.781e-11■■□□□ 13.2
NCBP2P52298 STAG3L5P-202ENST00000422479 683 ntTSL 28.45□□□□□ -1.061e-11■■□□□ 13.2
NCBP2P52298 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC10.47□□□□□ -0.737e-8■■□□□ 13.2
NCBP2P52298 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8□□□□□ -1.137e-8■■□□□ 13.2
NCBP2P52298 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.016e-9■■□□□ 13.2
NCBP2P52298 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.7□□□□□ -0.066e-9■■□□□ 13.2
NCBP2P52298 MECR-209ENST00000474946 631 ntTSL 213.32□□□□□ -0.286e-9■■□□□ 13.2
NCBP2P52298 MECR-204ENST00000463052 906 ntTSL 313.08□□□□□ -0.326e-9■■□□□ 13.2
NCBP2P52298 MECR-217ENST00000490529 832 ntTSL 312.89□□□□□ -0.356e-9■■□□□ 13.2
NCBP2P52298 MECR-218ENST00000493928 498 ntTSL 312.73□□□□□ -0.376e-9■■□□□ 13.2
NCBP2P52298 MECR-215ENST00000484012 598 ntTSL 312.73□□□□□ -0.376e-9■■□□□ 13.2
NCBP2P52298 MECR-216ENST00000489248 968 ntTSL 312.6□□□□□ -0.396e-9■■□□□ 13.2
NCBP2P52298 MECR-211ENST00000475861 770 ntTSL 512.39□□□□□ -0.436e-9■■□□□ 13.2
NCBP2P52298 MECR-213ENST00000482610 570 ntTSL 311.52□□□□□ -0.576e-9■■□□□ 13.2
NCBP2P52298 ZNF654-202ENST00000473136 1377 ntTSL 519.11■□□□□ 0.652e-9■■□□□ 13.2
NCBP2P52298 SAFB-209ENST00000591666 632 ntTSL 318.31■□□□□ 0.522e-9■■□□□ 13.2
NCBP2P52298 SAFB-204ENST00000586934 995 ntTSL 516.99■□□□□ 0.312e-9■■□□□ 13.2
NCBP2P52298 SAFB-207ENST00000589863 2708 ntTSL 215.99■□□□□ 0.152e-9■■□□□ 13.2
NCBP2P52298 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.035e-15■■□□□ 13.2
NCBP2P52298 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.112e-9■■□□□ 13.2
NCBP2P52298 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.132e-9■■□□□ 13.2
NCBP2P52298 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.172e-9■■□□□ 13.2
NCBP2P52298 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.322e-9■■□□□ 13.2
NCBP2P52298 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.332e-9■■□□□ 13.2
NCBP2P52298 MRPS21-202ENST00000614145 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.875e-15■■□□□ 13.2
NCBP2P52298 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC9.06□□□□□ -0.962e-9■■□□□ 13.2
NCBP2P52298 AC004980.1-204ENST00000429707 299 ntBASIC17.95■□□□□ 0.468e-13■■□□□ 13.2
NCBP2P52298 TYK2-213ENST00000529739 842 ntTSL 215.78■□□□□ 0.125e-9■■□□□ 13.2
NCBP2P52298 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.315e-9■■□□□ 13.2
NCBP2P52298 TYK2-221ENST00000592137 536 ntTSL 312.29□□□□□ -0.445e-9■■□□□ 13.2
NCBP2P52298 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.635e-9■■□□□ 13.2
NCBP2P52298 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC11.12□□□□□ -0.635e-9■■□□□ 13.2
NCBP2P52298 TYK2-215ENST00000530560 558 ntTSL 310.76□□□□□ -0.695e-9■■□□□ 13.2
NCBP2P52298 TYK2-208ENST00000527481 628 ntTSL 38.21□□□□□ -1.15e-9■■□□□ 13.2
NCBP2P52298 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.418e-8■■□□□ 13.2
NCBP2P52298 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.56□□□□□ -0.568e-8■■□□□ 13.2
NCBP2P52298 TAB2-206ENST00000606202 648 ntTSL 42.59□□□□□ -1.998e-8■■□□□ 13.2
NCBP2P52298 GRB10-212ENST00000439044 733 ntTSL 520.7■□□□□ 0.92e-8■■□□□ 13.2
NCBP2P52298 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.49■□□□□ 0.712e-8■■□□□ 13.2
NCBP2P52298 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.76■□□□□ 0.592e-8■■□□□ 13.2
NCBP2P52298 SLC4A2-218ENST00000494125 782 ntTSL 222.14■■□□□ 1.132e-18■■□□□ 13.2
NCBP2P52298 SLC4A2-213ENST00000483786 571 ntTSL 416.15■□□□□ 0.182e-18■■□□□ 13.2
NCBP2P52298 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.012e-18■■□□□ 13.2
Retrieved 100 of 18,329 protein–RNA pairs in 208.9 ms