RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
SAFB-207ENST00000589863 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
SAFB-207ENST00000589863 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
SAFB-207ENST00000589863 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
SAFB-207ENST00000589863 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.26
SAFB-207ENST00000589863 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
SAFB-207ENST00000589863 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
SAFB-207ENST00000589863 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
SAFB-207ENST00000589863 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
SAFB-207ENST00000589863 PCGF6Q9BYE7 350 aa28.05■■■□□ 2.08
SAFB-207ENST00000589863 HRCP23327 699 aa28.05■■■□□ 2.08
SAFB-207ENST00000589863 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
SAFB-207ENST00000589863 ABCC9O60706 1549 aa27.69■■■□□ 2.02
SAFB-207ENST00000589863 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
SAFB-207ENST00000589863 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
SAFB-207ENST00000589863 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
SAFB-207ENST00000589863 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
SAFB-207ENST00000589863 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
SAFB-207ENST00000589863 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
SAFB-207ENST00000589863 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
SAFB-207ENST00000589863 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.95
SAFB-207ENST00000589863 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
SAFB-207ENST00000589863 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
SAFB-207ENST00000589863 NACADO15069 1562 aa27.02■■□□□ 1.92
SAFB-207ENST00000589863 WIZO95785 1651 aa26.9■■□□□ 1.9
SAFB-207ENST00000589863 ZEB1P37275 1124 aaPredicted RBP26.67■■□□□ 1.86
SAFB-207ENST00000589863 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
SAFB-207ENST00000589863 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
SAFB-207ENST00000589863 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
SAFB-207ENST00000589863 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
SAFB-207ENST00000589863 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
SAFB-207ENST00000589863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
SAFB-207ENST00000589863 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
SAFB-207ENST00000589863 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SAFB-207ENST00000589863 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
SAFB-207ENST00000589863 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SAFB-207ENST00000589863 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
SAFB-207ENST00000589863 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.792e-11■□□□□ 8.5
SAFB-207ENST00000589863 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
SAFB-207ENST00000589863 CEP162Q5TB80 1403 aa26.14■■□□□ 1.78
SAFB-207ENST00000589863 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
SAFB-207ENST00000589863 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
SAFB-207ENST00000589863 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
SAFB-207ENST00000589863 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
SAFB-207ENST00000589863 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
SAFB-207ENST00000589863 TNIKQ9UKE5 1360 aa26.02■■□□□ 1.76
SAFB-207ENST00000589863 BICRAQ9NZM4 1560 aa25.94■■□□□ 1.74
SAFB-207ENST00000589863 EEA1Q15075 1411 aa25.89■■□□□ 1.73
SAFB-207ENST00000589863 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
SAFB-207ENST00000589863 DIEXFQ68CQ4 756 aaKnown RBP25.78■■□□□ 1.72
SAFB-207ENST00000589863 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
SAFB-207ENST00000589863 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
SAFB-207ENST00000589863 NEUROD1Q13562 356 aa25.7■■□□□ 1.7
SAFB-207ENST00000589863 RANGAP1P46060 587 aaPredicted RBP25.69■■□□□ 1.7
SAFB-207ENST00000589863 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
SAFB-207ENST00000589863 HNRNPUL2Q1KMD3 747 aaKnown RBP25.66■■□□□ 1.7
SAFB-207ENST00000589863 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
SAFB-207ENST00000589863 ACIN1Q9UKV3 1341 aaKnown RBP25.65■■□□□ 1.7
SAFB-207ENST00000589863 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
SAFB-207ENST00000589863 CLIP1P30622 1438 aa25.61■■□□□ 1.69
SAFB-207ENST00000589863 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
SAFB-207ENST00000589863 KIF21BO75037 1637 aa25.55■■□□□ 1.68
SAFB-207ENST00000589863 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
SAFB-207ENST00000589863 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
SAFB-207ENST00000589863 APLP2Q06481 763 aa25.43■■□□□ 1.66
SAFB-207ENST00000589863 GTF3C3Q9Y5Q9 886 aa25.43■■□□□ 1.66
SAFB-207ENST00000589863 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
SAFB-207ENST00000589863 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
SAFB-207ENST00000589863 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
SAFB-207ENST00000589863 YTHDC1Q96MU7 727 aaKnown RBP25.32■■□□□ 1.64
SAFB-207ENST00000589863 MIER1Q8N108 512 aa25.26■■□□□ 1.63
SAFB-207ENST00000589863 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.62
SAFB-207ENST00000589863 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
SAFB-207ENST00000589863 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
SAFB-207ENST00000589863 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
SAFB-207ENST00000589863 CUX1P39880 1505 aa25.14■■□□□ 1.61
SAFB-207ENST00000589863 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
SAFB-207ENST00000589863 NCAPD3P42695 1498 aa25.08■■□□□ 1.61
SAFB-207ENST00000589863 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
SAFB-207ENST00000589863 DHX57Q6P158 1386 aaKnown RBP25.04■■□□□ 1.6
SAFB-207ENST00000589863 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
SAFB-207ENST00000589863 CFTRP13569 1480 aa24.97■■□□□ 1.59
SAFB-207ENST00000589863 ITGAEP38570 1179 aa24.96■■□□□ 1.59
SAFB-207ENST00000589863 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
SAFB-207ENST00000589863 RRBP1Q9P2E9 1410 aaKnown RBP24.89■■□□□ 1.57
SAFB-207ENST00000589863 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
SAFB-207ENST00000589863 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
SAFB-207ENST00000589863 CUX2O14529 1486 aa24.83■■□□□ 1.57
SAFB-207ENST00000589863 IGF1RP08069 1367 aa24.81■■□□□ 1.56
SAFB-207ENST00000589863 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
SAFB-207ENST00000589863 P3H3Q8IVL6 736 aa24.7■■□□□ 1.54
SAFB-207ENST00000589863 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
SAFB-207ENST00000589863 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
SAFB-207ENST00000589863 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
SAFB-207ENST00000589863 ATP1B4Q9UN42 357 aaPredicted RBP24.63■■□□□ 1.53
SAFB-207ENST00000589863 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
SAFB-207ENST00000589863 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
SAFB-207ENST00000589863 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
SAFB-207ENST00000589863 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
SAFB-207ENST00000589863 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms