Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.14■□□□□ 0.81
RFC1P35251 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 AL353708.3-201ENST00000610272 989 ntBASIC20.14■□□□□ 0.81
RFC1P35251 AL445675.2-201ENST00000620291 557 ntBASIC20.14■□□□□ 0.81
RFC1P35251 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.14■□□□□ 0.81
RFC1P35251 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 IRX1P1-201ENST00000438849 1838 ntBASIC20.13■□□□□ 0.81
RFC1P35251 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 AP002982.1-201ENST00000492365 877 ntBASIC20.13■□□□□ 0.81
RFC1P35251 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.13■□□□□ 0.81
RFC1P35251 Z85996.1-201ENST00000494644 937 ntBASIC20.13■□□□□ 0.81
RFC1P35251 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 TNXA-203ENST00000507684 2038 ntBASIC20.13■□□□□ 0.81
RFC1P35251 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC1P35251 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC1P35251 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC1P35251 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 GCSHP5-201ENST00000443090 522 ntBASIC20.12■□□□□ 0.81
RFC1P35251 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.12■□□□□ 0.81
RFC1P35251 RARRES2P10-201ENST00000564312 460 ntBASIC20.12■□□□□ 0.81
RFC1P35251 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.12■□□□□ 0.81
RFC1P35251 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFC1P35251 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC1P35251 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC1P35251 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC1P35251 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC1P35251 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC1P35251 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 AC004980.1-204ENST00000429707 299 ntBASIC20.11■□□□□ 0.81
RFC1P35251 AL158047.1-201ENST00000445918 881 ntBASIC20.11■□□□□ 0.81
RFC1P35251 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC1P35251 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RFC1P35251 AF186192.3-201ENST00000583427 947 ntBASIC20.11■□□□□ 0.81
RFC1P35251 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC1P35251 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.11■□□□□ 0.81
RFC1P35251 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC1P35251 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms