Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DOBP13765 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DOBP13765 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DOBP13765 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DOBP13765 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DOBP13765 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 KRT8P41-201ENST00000533985 1514 ntBASIC17.13■□□□□ 0.33
HLA-DOBP13765 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 GCSHP5-201ENST00000443090 522 ntBASIC17.13■□□□□ 0.33
HLA-DOBP13765 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 AP002982.1-201ENST00000492365 877 ntBASIC17.13■□□□□ 0.33
HLA-DOBP13765 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DOBP13765 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 FP475955.4-201ENST00000623131 1990 ntBASIC17.13■□□□□ 0.33
HLA-DOBP13765 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DOBP13765 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 Z85996.1-201ENST00000494644 937 ntBASIC17.12■□□□□ 0.33
HLA-DOBP13765 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 AL445675.2-201ENST00000620291 557 ntBASIC17.12■□□□□ 0.33
HLA-DOBP13765 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DOBP13765 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DOBP13765 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 AC004980.1-204ENST00000429707 299 ntBASIC17.11■□□□□ 0.33
HLA-DOBP13765 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 RARRES2P10-201ENST00000564312 460 ntBASIC17.11■□□□□ 0.33
HLA-DOBP13765 AF186192.3-201ENST00000583427 947 ntBASIC17.11■□□□□ 0.33
HLA-DOBP13765 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 AL353708.3-201ENST00000610272 989 ntBASIC17.11■□□□□ 0.33
HLA-DOBP13765 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DOBP13765 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DOBP13765 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms