Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA2P01906 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.17■□□□□ 0.34
HLA-DQA2P01906 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 AC069152.1-201ENST00000438030 544 ntBASIC17.16■□□□□ 0.34
HLA-DQA2P01906 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 AC008687.6-201ENST00000596318 630 ntBASIC17.16■□□□□ 0.34
HLA-DQA2P01906 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA2P01906 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TUBB8P6-201ENST00000436895 1288 ntBASIC17.15■□□□□ 0.34
HLA-DQA2P01906 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQA2P01906 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DQA2P01906 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 AL049812.1-201ENST00000432563 2267 ntBASIC17.14■□□□□ 0.33
HLA-DQA2P01906 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQA2P01906 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms