Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM6-TRIM34B2RNG4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TMEM191A-211ENST00000637163 1067 ntBASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 IRX1P1-201ENST00000438849 1838 ntBASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TNXA-203ENST00000507684 2038 ntBASIC23.37■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AL445675.2-201ENST00000620291 557 ntBASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC020763.4-201ENST00000623414 4170 ntBASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 GCSHP5-201ENST00000443090 522 ntBASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC131212.4-201ENST00000623606 975 ntBASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 AC004408.2-201ENST00000623613 2777 ntBASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM6-TRIM34B2RNG4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM6-TRIM34B2RNG4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM6-TRIM34B2RNG4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms