Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AL162741.1-201ENST00000565563 1558 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV27A0A0K0K1C4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV27A0A0K0K1C4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 AC231657.2-201ENST00000624556 255 ntBASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 MKRN4P-201ENST00000444706 1521 ntBASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV27A0A0K0K1C4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 YBX1P10-201ENST00000444752 975 ntBASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 AP000997.3-201ENST00000623333 2250 ntBASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV27A0A0K0K1C4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms