Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 AL161938.1-201ENST00000569833 2180 ntBASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 AC141586.3-201ENST00000562166 1838 ntBASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TUBB8P6-201ENST00000436895 1288 ntBASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 AC093503.3-201ENST00000624917 2352 ntBASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 AC142086.2-201ENST00000569753 217 ntBASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 OR6D1P-202ENST00000641007 5290 ntBASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-3A0A0B4J271 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 AL049812.1-201ENST00000432563 2267 ntBASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 SDHAP1-207ENST00000440850 2000 ntBASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms