Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.96■■□□□ 1.91
RFFLQ8WZ73 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFFLQ8WZ73 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.96■■□□□ 1.91
RFFLQ8WZ73 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.95■■□□□ 1.91
RFFLQ8WZ73 AC135983.2-203ENST00000454486 1613 ntBASIC26.95■■□□□ 1.91
RFFLQ8WZ73 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFFLQ8WZ73 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.95■■□□□ 1.9
RFFLQ8WZ73 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.95■■□□□ 1.9
RFFLQ8WZ73 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.95■■□□□ 1.9
RFFLQ8WZ73 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFFLQ8WZ73 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RFFLQ8WZ73 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RFFLQ8WZ73 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RFFLQ8WZ73 AC108673.1-201ENST00000510422 1159 ntBASIC26.92■■□□□ 1.9
RFFLQ8WZ73 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.92■■□□□ 1.9
RFFLQ8WZ73 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RFFLQ8WZ73 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFFLQ8WZ73 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFFLQ8WZ73 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFFLQ8WZ73 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RFFLQ8WZ73 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFFLQ8WZ73 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFFLQ8WZ73 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFFLQ8WZ73 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
RFFLQ8WZ73 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFFLQ8WZ73 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFFLQ8WZ73 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFFLQ8WZ73 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RFFLQ8WZ73 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFFLQ8WZ73 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.88■■□□□ 1.89
RFFLQ8WZ73 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFFLQ8WZ73 MIR6090-201ENST00000622481 60 ntBASIC26.88■■□□□ 1.89
RFFLQ8WZ73 WHAMMP2-203ENST00000563942 1603 ntBASIC26.87■■□□□ 1.89
RFFLQ8WZ73 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RFFLQ8WZ73 ABHD17AP4-201ENST00000411545 909 ntBASIC26.87■■□□□ 1.89
RFFLQ8WZ73 DUX4L28-201ENST00000623687 678 ntBASIC26.87■■□□□ 1.89
RFFLQ8WZ73 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.87■■□□□ 1.89
RFFLQ8WZ73 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFFLQ8WZ73 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.86■■□□□ 1.89
RFFLQ8WZ73 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.86■■□□□ 1.89
RFFLQ8WZ73 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFFLQ8WZ73 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFFLQ8WZ73 AC087741.3-201ENST00000624270 1347 ntBASIC26.86■■□□□ 1.89
RFFLQ8WZ73 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
RFFLQ8WZ73 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFFLQ8WZ73 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.85■■□□□ 1.89
RFFLQ8WZ73 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFFLQ8WZ73 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
RFFLQ8WZ73 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFFLQ8WZ73 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RFFLQ8WZ73 LINC00273-201ENST00000539813 1452 ntBASIC26.83■■□□□ 1.89
RFFLQ8WZ73 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
RFFLQ8WZ73 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RFFLQ8WZ73 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.82■■□□□ 1.88
RFFLQ8WZ73 MIR7108-201ENST00000614319 87 ntBASIC26.82■■□□□ 1.88
RFFLQ8WZ73 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.82■■□□□ 1.88
RFFLQ8WZ73 AC018358.1-201ENST00000631079 1402 ntBASIC26.82■■□□□ 1.88
RFFLQ8WZ73 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RFFLQ8WZ73 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RFFLQ8WZ73 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RFFLQ8WZ73 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.81■■□□□ 1.88
RFFLQ8WZ73 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFFLQ8WZ73 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFFLQ8WZ73 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.8■■□□□ 1.88
RFFLQ8WZ73 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.8■■□□□ 1.88
RFFLQ8WZ73 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.8■■□□□ 1.88
RFFLQ8WZ73 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFFLQ8WZ73 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RFFLQ8WZ73 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.77■■□□□ 1.88
RFFLQ8WZ73 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
RFFLQ8WZ73 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RFFLQ8WZ73 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFFLQ8WZ73 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 AC044849.2-201ENST00000606596 710 ntBASIC26.75■■□□□ 1.87
RFFLQ8WZ73 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.75■■□□□ 1.87
RFFLQ8WZ73 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFFLQ8WZ73 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.74■■□□□ 1.87
RFFLQ8WZ73 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RFFLQ8WZ73 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFFLQ8WZ73 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RFFLQ8WZ73 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFFLQ8WZ73 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFFLQ8WZ73 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
RFFLQ8WZ73 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RFFLQ8WZ73 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RFFLQ8WZ73 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RFFLQ8WZ73 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms