Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HMGCLL1Q8TB92 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.98■■□□□ 1.59
HMGCLL1Q8TB92 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HMGCLL1Q8TB92 AC135983.2-203ENST00000454486 1613 ntBASIC24.97■■□□□ 1.59
HMGCLL1Q8TB92 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.97■■□□□ 1.59
HMGCLL1Q8TB92 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.97■■□□□ 1.59
HMGCLL1Q8TB92 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.97■■□□□ 1.59
HMGCLL1Q8TB92 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.97■■□□□ 1.59
HMGCLL1Q8TB92 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HMGCLL1Q8TB92 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.96■■□□□ 1.59
HMGCLL1Q8TB92 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.96■■□□□ 1.59
HMGCLL1Q8TB92 ZNRF2P2-203ENST00000454624 420 ntBASIC24.96■■□□□ 1.59
HMGCLL1Q8TB92 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
HMGCLL1Q8TB92 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
HMGCLL1Q8TB92 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.95■■□□□ 1.58
HMGCLL1Q8TB92 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HMGCLL1Q8TB92 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HMGCLL1Q8TB92 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HMGCLL1Q8TB92 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
HMGCLL1Q8TB92 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HMGCLL1Q8TB92 LINC01971-201ENST00000617888 1048 ntBASIC24.92■■□□□ 1.58
HMGCLL1Q8TB92 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HMGCLL1Q8TB92 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
HMGCLL1Q8TB92 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HMGCLL1Q8TB92 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HMGCLL1Q8TB92 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HMGCLL1Q8TB92 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HMGCLL1Q8TB92 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HMGCLL1Q8TB92 WHAMMP2-203ENST00000563942 1603 ntBASIC24.9■■□□□ 1.58
HMGCLL1Q8TB92 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HMGCLL1Q8TB92 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
HMGCLL1Q8TB92 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HMGCLL1Q8TB92 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HMGCLL1Q8TB92 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HMGCLL1Q8TB92 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.88■■□□□ 1.57
HMGCLL1Q8TB92 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCLL1Q8TB92 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HMGCLL1Q8TB92 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCLL1Q8TB92 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCLL1Q8TB92 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCLL1Q8TB92 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCLL1Q8TB92 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.86■■□□□ 1.57
HMGCLL1Q8TB92 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.85■■□□□ 1.57
HMGCLL1Q8TB92 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCLL1Q8TB92 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCLL1Q8TB92 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCLL1Q8TB92 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HMGCLL1Q8TB92 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.84■■□□□ 1.57
HMGCLL1Q8TB92 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.83■■□□□ 1.57
HMGCLL1Q8TB92 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.83■■□□□ 1.56
HMGCLL1Q8TB92 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 BX255925.1-201ENST00000566954 1854 ntBASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
HMGCLL1Q8TB92 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCLL1Q8TB92 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.81■■□□□ 1.56
HMGCLL1Q8TB92 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.81■■□□□ 1.56
HMGCLL1Q8TB92 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.8■■□□□ 1.56
HMGCLL1Q8TB92 DUX4L11-201ENST00000611504 1267 ntBASIC24.8■■□□□ 1.56
HMGCLL1Q8TB92 DUX4L12-201ENST00000614593 1267 ntBASIC24.8■■□□□ 1.56
HMGCLL1Q8TB92 DUX4L14-201ENST00000621227 1267 ntBASIC24.8■■□□□ 1.56
HMGCLL1Q8TB92 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.79■■□□□ 1.56
HMGCLL1Q8TB92 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HMGCLL1Q8TB92 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.79■■□□□ 1.56
HMGCLL1Q8TB92 MIR7108-201ENST00000614319 87 ntBASIC24.79■■□□□ 1.56
HMGCLL1Q8TB92 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HMGCLL1Q8TB92 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
HMGCLL1Q8TB92 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms