Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD1LQ86WJ1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CHD1LQ86WJ1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHD1LQ86WJ1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.49■■■□□ 2.63
CHD1LQ86WJ1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHD1LQ86WJ1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.49■■■□□ 2.63
CHD1LQ86WJ1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.49■■■□□ 2.63
CHD1LQ86WJ1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
CHD1LQ86WJ1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD1LQ86WJ1 AC044849.2-201ENST00000606596 710 ntBASIC31.48■■■□□ 2.63
CHD1LQ86WJ1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD1LQ86WJ1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHD1LQ86WJ1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHD1LQ86WJ1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.47■■■□□ 2.63
CHD1LQ86WJ1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.47■■■□□ 2.63
CHD1LQ86WJ1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHD1LQ86WJ1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.45■■■□□ 2.63
CHD1LQ86WJ1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHD1LQ86WJ1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.45■■■□□ 2.63
CHD1LQ86WJ1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CHD1LQ86WJ1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.45■■■□□ 2.62
CHD1LQ86WJ1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.44■■■□□ 2.62
CHD1LQ86WJ1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1LQ86WJ1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
CHD1LQ86WJ1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1LQ86WJ1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1LQ86WJ1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1LQ86WJ1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1LQ86WJ1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1LQ86WJ1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1LQ86WJ1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1LQ86WJ1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.4■■■□□ 2.62
CHD1LQ86WJ1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHD1LQ86WJ1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CHD1LQ86WJ1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1LQ86WJ1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CHD1LQ86WJ1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.36■■■□□ 2.61
CHD1LQ86WJ1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.36■■■□□ 2.61
CHD1LQ86WJ1 AC018358.1-201ENST00000631079 1402 ntBASIC31.36■■■□□ 2.61
CHD1LQ86WJ1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1LQ86WJ1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1LQ86WJ1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1LQ86WJ1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1LQ86WJ1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1LQ86WJ1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.33■■■□□ 2.61
CHD1LQ86WJ1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD1LQ86WJ1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CHD1LQ86WJ1 AC021231.2-201ENST00000594613 730 ntBASIC31.32■■■□□ 2.6
CHD1LQ86WJ1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD1LQ86WJ1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.31■■■□□ 2.6
CHD1LQ86WJ1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CHD1LQ86WJ1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1LQ86WJ1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1LQ86WJ1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1LQ86WJ1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1LQ86WJ1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CHD1LQ86WJ1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.29■■■□□ 2.6
CHD1LQ86WJ1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHD1LQ86WJ1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1LQ86WJ1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1LQ86WJ1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHD1LQ86WJ1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CHD1LQ86WJ1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1LQ86WJ1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1LQ86WJ1 RPS2P35-201ENST00000443417 897 ntBASIC31.24■■■□□ 2.59
CHD1LQ86WJ1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1LQ86WJ1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CHD1LQ86WJ1 DUX4L29-201ENST00000425409 679 ntBASIC31.23■■■□□ 2.59
CHD1LQ86WJ1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.23■■■□□ 2.59
CHD1LQ86WJ1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CHD1LQ86WJ1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.22■■■□□ 2.59
CHD1LQ86WJ1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1LQ86WJ1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.22■■■□□ 2.59
CHD1LQ86WJ1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CHD1LQ86WJ1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms