Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.21■■□□□ 1.31
RBM48Q5RL73 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.21■■□□□ 1.31
RBM48Q5RL73 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBM48Q5RL73 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
RBM48Q5RL73 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.2■■□□□ 1.3
RBM48Q5RL73 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBM48Q5RL73 ZNRF2P1-201ENST00000441407 443 ntBASIC23.19■■□□□ 1.3
RBM48Q5RL73 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.19■■□□□ 1.3
RBM48Q5RL73 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBM48Q5RL73 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBM48Q5RL73 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBM48Q5RL73 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RBM48Q5RL73 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBM48Q5RL73 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBM48Q5RL73 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RBM48Q5RL73 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.18■■□□□ 1.3
RBM48Q5RL73 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBM48Q5RL73 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBM48Q5RL73 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBM48Q5RL73 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RBM48Q5RL73 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RBM48Q5RL73 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RBM48Q5RL73 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RBM48Q5RL73 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
RBM48Q5RL73 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RBM48Q5RL73 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RBM48Q5RL73 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBM48Q5RL73 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.13■■□□□ 1.29
RBM48Q5RL73 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.13■■□□□ 1.29
RBM48Q5RL73 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM48Q5RL73 DYNLL1-208ENST00000550178 581 ntBASIC23.13■■□□□ 1.29
RBM48Q5RL73 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RBM48Q5RL73 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
RBM48Q5RL73 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.12■■□□□ 1.29
RBM48Q5RL73 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.12■■□□□ 1.29
RBM48Q5RL73 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.11■■□□□ 1.29
RBM48Q5RL73 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBM48Q5RL73 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM48Q5RL73 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM48Q5RL73 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM48Q5RL73 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM48Q5RL73 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM48Q5RL73 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.1■■□□□ 1.29
RBM48Q5RL73 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.1■■□□□ 1.29
RBM48Q5RL73 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM48Q5RL73 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.09■■□□□ 1.29
RBM48Q5RL73 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RBM48Q5RL73 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBM48Q5RL73 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RBM48Q5RL73 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBM48Q5RL73 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RBM48Q5RL73 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RBM48Q5RL73 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RBM48Q5RL73 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RBM48Q5RL73 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RBM48Q5RL73 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RBM48Q5RL73 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RBM48Q5RL73 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RBM48Q5RL73 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.06■■□□□ 1.28
RBM48Q5RL73 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RBM48Q5RL73 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RBM48Q5RL73 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RBM48Q5RL73 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RBM48Q5RL73 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RBM48Q5RL73 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RBM48Q5RL73 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RBM48Q5RL73 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RBM48Q5RL73 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RBM48Q5RL73 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.04■■□□□ 1.28
RBM48Q5RL73 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RBM48Q5RL73 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.03■■□□□ 1.28
RBM48Q5RL73 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RBM48Q5RL73 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RBM48Q5RL73 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBM48Q5RL73 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBM48Q5RL73 DUSP8P4-201ENST00000399538 1761 ntBASIC23.03■■□□□ 1.28
RBM48Q5RL73 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
RBM48Q5RL73 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.02■■□□□ 1.28
RBM48Q5RL73 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RBM48Q5RL73 AP002414.2-202ENST00000590929 1450 ntBASIC23.01■■□□□ 1.27
RBM48Q5RL73 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.01■■□□□ 1.27
RBM48Q5RL73 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RBM48Q5RL73 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RBM48Q5RL73 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RBM48Q5RL73 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RBM48Q5RL73 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RBM48Q5RL73 AL031258.1-201ENST00000623562 325 ntBASIC23■■□□□ 1.27
RBM48Q5RL73 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RBM48Q5RL73 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23■■□□□ 1.27
RBM48Q5RL73 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RBM48Q5RL73 AC100797.4-201ENST00000631653 1827 ntBASIC22.99■■□□□ 1.27
RBM48Q5RL73 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RBM48Q5RL73 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.99■■□□□ 1.27
RBM48Q5RL73 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RBM48Q5RL73 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RBM48Q5RL73 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RBM48Q5RL73 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBM48Q5RL73 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBM48Q5RL73 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.97■■□□□ 1.27
RBM48Q5RL73 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms