Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.26■■■□□ 2.43
NEK4P51957 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NEK4P51957 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.26■■■□□ 2.43
NEK4P51957 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.26■■■□□ 2.43
NEK4P51957 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NEK4P51957 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.25■■■□□ 2.43
NEK4P51957 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
NEK4P51957 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
NEK4P51957 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NEK4P51957 WHAMMP2-203ENST00000563942 1603 ntBASIC30.24■■■□□ 2.43
NEK4P51957 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NEK4P51957 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NEK4P51957 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NEK4P51957 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.23■■■□□ 2.43
NEK4P51957 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
NEK4P51957 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NEK4P51957 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NEK4P51957 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NEK4P51957 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
NEK4P51957 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.21■■■□□ 2.43
NEK4P51957 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
NEK4P51957 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
NEK4P51957 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NEK4P51957 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NEK4P51957 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NEK4P51957 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.19■■■□□ 2.42
NEK4P51957 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
NEK4P51957 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NEK4P51957 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.18■■■□□ 2.42
NEK4P51957 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NEK4P51957 MIR3665-201ENST00000578708 105 ntBASIC30.17■■■□□ 2.42
NEK4P51957 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
NEK4P51957 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
NEK4P51957 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NEK4P51957 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NEK4P51957 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
NEK4P51957 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
NEK4P51957 LINC00273-201ENST00000539813 1452 ntBASIC30.14■■■□□ 2.42
NEK4P51957 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
NEK4P51957 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.13■■■□□ 2.41
NEK4P51957 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.13■■■□□ 2.41
NEK4P51957 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.13■■■□□ 2.41
NEK4P51957 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NEK4P51957 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
NEK4P51957 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.12■■■□□ 2.41
NEK4P51957 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NEK4P51957 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
NEK4P51957 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
NEK4P51957 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.12■■■□□ 2.41
NEK4P51957 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
NEK4P51957 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NEK4P51957 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
NEK4P51957 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NEK4P51957 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.1■■■□□ 2.41
NEK4P51957 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
NEK4P51957 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
NEK4P51957 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.09■■■□□ 2.41
NEK4P51957 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NEK4P51957 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.08■■■□□ 2.41
NEK4P51957 AP006261.1-201ENST00000584783 668 ntBASIC30.07■■■□□ 2.4
NEK4P51957 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
NEK4P51957 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NEK4P51957 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.06■■■□□ 2.4
NEK4P51957 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NEK4P51957 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.05■■■□□ 2.4
NEK4P51957 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
NEK4P51957 AC018358.1-201ENST00000631079 1402 ntBASIC30.05■■■□□ 2.4
NEK4P51957 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NEK4P51957 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NEK4P51957 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
NEK4P51957 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
NEK4P51957 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NEK4P51957 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NEK4P51957 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NEK4P51957 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.03■■■□□ 2.4
NEK4P51957 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NEK4P51957 AC087741.3-201ENST00000624270 1347 ntBASIC30.02■■■□□ 2.4
NEK4P51957 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
NEK4P51957 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NEK4P51957 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.02■■■□□ 2.4
NEK4P51957 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
NEK4P51957 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
NEK4P51957 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NEK4P51957 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.01■■■□□ 2.39
NEK4P51957 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30■■■□□ 2.39
NEK4P51957 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NEK4P51957 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30■■■□□ 2.39
NEK4P51957 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NEK4P51957 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.99■■■□□ 2.39
NEK4P51957 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
NEK4P51957 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NEK4P51957 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.98■■■□□ 2.39
NEK4P51957 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.98■■■□□ 2.39
NEK4P51957 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.98■■■□□ 2.39
NEK4P51957 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
NEK4P51957 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NEK4P51957 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.97■■■□□ 2.39
NEK4P51957 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NEK4P51957 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.96■■■□□ 2.39
NEK4P51957 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms