Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 tA(UGC)LtA(UGC)L 73 nt6.18□□□□□ -1.42
TDA4P47153 tA(UGC)OtA(UGC)O 73 nt6.18□□□□□ -1.42
TDA4P47153 SWM1YDR260C 513 nt6.18□□□□□ -1.42
TDA4P47153 CKB1YGL019W 837 nt6.18□□□□□ -1.42
TDA4P47153 YMR166CYMR166C 1107 nt6.18□□□□□ -1.42
TDA4P47153 OLA1YBR025C 1185 nt6.18□□□□□ -1.42
TDA4P47153 YIL108WYIL108W 2091 nt6.18□□□□□ -1.42
TDA4P47153 YKR018CYKR018C 2178 nt6.17□□□□□ -1.42
TDA4P47153 ADE5,7YGL234W 2409 nt6.17□□□□□ -1.42
TDA4P47153 PEX28YHR150W 1740 nt6.17□□□□□ -1.42
TDA4P47153 RPL12BYDR418W 498 nt6.17□□□□□ -1.42
TDA4P47153 YMR007WYMR007W 381 nt6.17□□□□□ -1.42
TDA4P47153 YPL108WYPL108W 507 nt6.17□□□□□ -1.42
TDA4P47153 RCF1YML030W 480 nt6.16□□□□□ -1.42
TDA4P47153 RCR1YBR005W 642 nt6.16□□□□□ -1.42
TDA4P47153 FCY1YPR062W 477 nt6.16□□□□□ -1.42
TDA4P47153 ALG7YBR243C 1347 nt6.16□□□□□ -1.42
TDA4P47153 MAS2YHR024C 1449 nt6.16□□□□□ -1.42
TDA4P47153 AVL9YLR114C 2295 nt6.15□□□□□ -1.42
TDA4P47153 YJL045WYJL045W 1905 nt6.15□□□□□ -1.42
TDA4P47153 ARO3YDR035W 1113 nt6.15□□□□□ -1.42
TDA4P47153 YER137CYER137C 447 nt6.15□□□□□ -1.42
TDA4P47153 YGR137WYGR137W 375 nt6.15□□□□□ -1.42
TDA4P47153 MET22YOL064C 1074 nt6.15□□□□□ -1.42
TDA4P47153 TPO1YLL028W 1761 nt6.15□□□□□ -1.43
TDA4P47153 MAL31YBR298C 1845 nt6.15□□□□□ -1.43
TDA4P47153 OCH1YGL038C 1443 nt6.14□□□□□ -1.43
TDA4P47153 PRB1YEL060C 1908 nt6.13□□□□□ -1.43
TDA4P47153 YER152W-AYER152W-A 567 nt6.13□□□□□ -1.43
TDA4P47153 GNA1YFL017C 480 nt6.13□□□□□ -1.43
TDA4P47153 CAK1YFL029C 1107 nt6.13□□□□□ -1.43
TDA4P47153 LSP1YPL004C 1026 nt6.13□□□□□ -1.43
TDA4P47153 BNA3YJL060W 1335 nt6.13□□□□□ -1.43
TDA4P47153 YNL040WYNL040W 1371 nt6.13□□□□□ -1.43
TDA4P47153 SEC24YIL109C 2781 nt6.12□□□□□ -1.43
TDA4P47153 PDC6YGR087C 1692 nt6.12□□□□□ -1.43
TDA4P47153 YIA6YIL006W 1122 nt6.12□□□□□ -1.43
TDA4P47153 RRT14YIL127C 621 nt6.12□□□□□ -1.43
TDA4P47153 CDA1YLR307W 906 nt6.12□□□□□ -1.43
TDA4P47153 ELP6YMR312W 822 nt6.12□□□□□ -1.43
TDA4P47153 TES1YJR019C 1050 nt6.11□□□□□ -1.43
TDA4P47153 TOD6YBL054W 1578 nt6.1□□□□□ -1.43
TDA4P47153 RNA170RNA170 169 nt6.1□□□□□ -1.43
TDA4P47153 YOR041CYOR041C 432 nt6.09□□□□□ -1.43
TDA4P47153 HXT13YEL069C 1695 nt6.09□□□□□ -1.43
TDA4P47153 YPT31YER031C 672 nt6.08□□□□□ -1.44
TDA4P47153 SNA3YJL151C 402 nt6.08□□□□□ -1.44
TDA4P47153 RIB1YBL033C 1038 nt6.08□□□□□ -1.44
TDA4P47153 RHO1YPR165W 630 nt6.08□□□□□ -1.44
TDA4P47153 YBL113CYBL113C 2379 nt6.07□□□□□ -1.44
TDA4P47153 YBL111CYBL111C 2004 nt6.07□□□□□ -1.44
TDA4P47153 GUT1YHL032C 2130 nt6.07□□□□□ -1.44
TDA4P47153 CDC23YHR166C 1881 nt6.07□□□□□ -1.44
TDA4P47153 FCP1YMR277W 2199 nt6.06□□□□□ -1.44
TDA4P47153 SOD2YHR008C 702 nt6.06□□□□□ -1.44
TDA4P47153 YJL160CYJL160C 864 nt6.06□□□□□ -1.44
TDA4P47153 MTC6YHR151C 1581 nt6.06□□□□□ -1.44
TDA4P47153 YPR084WYPR084W 1371 nt6.06□□□□□ -1.44
TDA4P47153 GTS1YGL181W 1191 nt6.05□□□□□ -1.44
TDA4P47153 RMD8YFR048W 1989 nt6.05□□□□□ -1.44
TDA4P47153 PUP3YER094C 618 nt6.04□□□□□ -1.44
TDA4P47153 APT1YML022W 564 nt6.04□□□□□ -1.44
TDA4P47153 YMR206WYMR206W 942 nt6.04□□□□□ -1.44
TDA4P47153 RCF2YNR018W 675 nt6.04□□□□□ -1.44
TDA4P47153 THI73YLR004C 1572 nt6.04□□□□□ -1.44
TDA4P47153 DCR2YLR361C 1737 nt6.03□□□□□ -1.44
TDA4P47153 TCB1YOR086C 3561 nt6.03□□□□□ -1.44
TDA4P47153 SNP1YIL061C 903 nt6.03□□□□□ -1.44
TDA4P47153 YNR001W-AYNR001W-A 219 nt6.03□□□□□ -1.44
TDA4P47153 PET18YCR020C 648 nt6.02□□□□□ -1.45
TDA4P47153 YER156CYER156C 1017 nt6.02□□□□□ -1.45
TDA4P47153 YJL043WYJL043W 774 nt6.02□□□□□ -1.45
TDA4P47153 SNF7YLR025W 723 nt6.02□□□□□ -1.45
TDA4P47153 MFT1YML062C 1179 nt6.02□□□□□ -1.45
TDA4P47153 CDC13YDL220C 2775 nt6.02□□□□□ -1.45
TDA4P47153 FLC2YAL053W 2352 nt6.02□□□□□ -1.45
TDA4P47153 LEO1YOR123C 1395 nt6.02□□□□□ -1.45
TDA4P47153 CMK2YOL016C 1344 nt6.01□□□□□ -1.45
TDA4P47153 RFS1YBR052C 633 nt6.01□□□□□ -1.45
TDA4P47153 CAN1YEL063C 1773 nt6.01□□□□□ -1.45
TDA4P47153 PPS1YBR276C 2424 nt6□□□□□ -1.45
TDA4P47153 HXT8YJL214W 1710 nt6□□□□□ -1.45
TDA4P47153 YGR068W-AYGR068W-A 96 nt6□□□□□ -1.45
TDA4P47153 YHL030W-AYHL030W-A 462 nt6□□□□□ -1.45
TDA4P47153 BXI1YNL305C 894 nt6□□□□□ -1.45
TDA4P47153 PRE10YOR362C 867 nt6□□□□□ -1.45
TDA4P47153 RPS6AYPL090C 711 nt6□□□□□ -1.45
TDA4P47153 RPS6BYBR181C 711 nt6□□□□□ -1.45
TDA4P47153 ENB1YOL158C 1821 nt5.99□□□□□ -1.45
TDA4P47153 PMU1YKL128C 888 nt5.99□□□□□ -1.45
TDA4P47153 MSB3YNL293W 1902 nt5.99□□□□□ -1.45
TDA4P47153 SHC1YER096W 1539 nt5.98□□□□□ -1.45
TDA4P47153 TPI1YDR050C 747 nt5.97□□□□□ -1.45
TDA4P47153 HNM1YGL077C 1692 nt5.97□□□□□ -1.45
TDA4P47153 CCR4YAL021C 2514 nt5.96□□□□□ -1.45
TDA4P47153 HRA1HRA1 564 nt5.96□□□□□ -1.46
TDA4P47153 PET10YKR046C 852 nt5.96□□□□□ -1.46
TDA4P47153 Q0010Q0010 387 nt5.96□□□□□ -1.46
TDA4P47153 TIM50YPL063W 1431 nt5.96□□□□□ -1.46
TDA4P47153 MSS51YLR203C 1311 nt5.96□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms