RNA–Protein interactions for RNA: YOL016C

CMK2, Transcript of Calmodulin-dependent protein kinase, yeastyeast

Gene CMK2, Length 1,344 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMK2YOL016C RQC2Q12532 1038 aaKnown RBP12□□□□□ -0.49
CMK2YOL016C MTC1P47018 478 aaKnown RBP11.35□□□□□ -0.59
CMK2YOL016C BFR2Q06631 534 aaKnown RBP11.32□□□□□ -0.6
CMK2YOL016C TAF7Q05021 590 aa11.23□□□□□ -0.61
CMK2YOL016C TFA1P36100 482 aa10.67□□□□□ -0.7
CMK2YOL016C DRS1P32892 752 aaKnown RBP10.62□□□□□ -0.71
CMK2YOL016C URN1Q06525 465 aaKnown RBP10.54□□□□□ -0.72
CMK2YOL016C FAP1P53971 965 aa10.15□□□□□ -0.78
CMK2YOL016C SIS2P36024 562 aa10.02□□□□□ -0.81
CMK2YOL016C YRB30P53107 440 aaPredicted RBP9.99□□□□□ -0.81
CMK2YOL016C EBP2P36049 427 aaKnown RBP9.97□□□□□ -0.81
CMK2YOL016C CAB3P36076 571 aa9.97□□□□□ -0.81
CMK2YOL016C AIM44Q99299 758 aa9.86□□□□□ -0.83
CMK2YOL016C NAP1P25293 417 aaKnown RBP9.82□□□□□ -0.84
CMK2YOL016C MON2P48563 1636 aaPredicted RBP9.78□□□□□ -0.84
CMK2YOL016C LEO1P38439 464 aa9.77□□□□□ -0.85
CMK2YOL016C YFR016CP43597 1233 aaKnown RBP9.74□□□□□ -0.85
CMK2YOL016C NOP2P40991 618 aaKnown RBP9.71□□□□□ -0.86
CMK2YOL016C RPS0BP46654 252 aaKnown RBP9.71□□□□□ -0.86
CMK2YOL016C INO80P53115 1489 aa9.67□□□□□ -0.86
CMK2YOL016C MNN4P36044 1178 aa9.65□□□□□ -0.86
CMK2YOL016C PRI1P10363 409 aa9.56□□□□□ -0.88
CMK2YOL016C PRY3P47033 881 aa9.56□□□□□ -0.88
CMK2YOL016C DIP2Q12220 943 aaPredicted RBP9.56□□□□□ -0.88
CMK2YOL016C IOC4Q04213 475 aa9.56□□□□□ -0.88
CMK2YOL016C KRI1P42846 591 aaKnown RBP9.52□□□□□ -0.89
CMK2YOL016C AAD16Q02895 342 aa9.5□□□□□ -0.89
CMK2YOL016C DMA1P38823 416 aa9.47□□□□□ -0.89
CMK2YOL016C ISW2Q08773 1120 aa9.41□□□□□ -0.9
CMK2YOL016C TOP1P04786 769 aa9.39□□□□□ -0.91
CMK2YOL016C RSE1Q04693 1361 aaKnown RBP9.39□□□□□ -0.91
CMK2YOL016C AVT3P36062 692 aa9.38□□□□□ -0.91
CMK2YOL016C SNU71P53207 620 aaKnown RBP9.31□□□□□ -0.92
CMK2YOL016C RPG1P38249 964 aaKnown RBP9.29□□□□□ -0.92
CMK2YOL016C DEF1P35732 738 aaKnown RBP9.24□□□□□ -0.93
CMK2YOL016C DNA2P38859 1522 aa9.24□□□□□ -0.93
CMK2YOL016C IFH1P39520 1085 aa9.19□□□□□ -0.94
CMK2YOL016C FPR3P38911 411 aaKnown RBP9.13□□□□□ -0.95
CMK2YOL016C CWC22P53333 577 aaKnown RBP9.12□□□□□ -0.95
CMK2YOL016C HSP82P02829 709 aaKnown RBP9.09□□□□□ -0.95
CMK2YOL016C PLP2Q12017 286 aa9.08□□□□□ -0.96
CMK2YOL016C MDG1P53885 366 aa9.07□□□□□ -0.96
CMK2YOL016C ORC1P54784 914 aaPredicted RBP9.06□□□□□ -0.96
CMK2YOL016C RLF2Q12495 606 aa9.06□□□□□ -0.96
CMK2YOL016C YCK3P39962 524 aa9.05□□□□□ -0.96
CMK2YOL016C SAS10Q12136 610 aaPredicted RBP9.05□□□□□ -0.96
CMK2YOL016C PSH1Q12161 406 aa9.05□□□□□ -0.96
CMK2YOL016C YPR148CQ06523 435 aa9.03□□□□□ -0.96
CMK2YOL016C RPS0AP32905 252 aaKnown RBP9.01□□□□□ -0.97
CMK2YOL016C TSR3Q12094 313 aaKnown RBP9.01□□□□□ -0.97
CMK2YOL016C HAA1Q12753 694 aaKnown RBP9.01□□□□□ -0.97
CMK2YOL016C TCB2P48231 1178 aa9□□□□□ -0.97
CMK2YOL016C SUB1P54000 292 aaKnown RBP9□□□□□ -0.97
CMK2YOL016C RLP24Q07915 199 aaKnown RBP9□□□□□ -0.97
CMK2YOL016C NOP53Q12080 455 aaKnown RBP9□□□□□ -0.97
CMK2YOL016C QCR6P00127 147 aa8.99□□□□□ -0.97
CMK2YOL016C NUG1P40010 520 aaKnown RBP8.99□□□□□ -0.97
CMK2YOL016C HIF1Q12373 385 aa8.98□□□□□ -0.97
CMK2YOL016C BRL1P38770 471 aa8.97□□□□□ -0.97
CMK2YOL016C KOG1P38873 1557 aa8.97□□□□□ -0.97
CMK2YOL016C RIX1P38883 763 aaPredicted RBP8.96□□□□□ -0.98
CMK2YOL016C GIN4Q12263 1142 aa8.96□□□□□ -0.98
CMK2YOL016C VPS72Q03388 795 aa8.95□□□□□ -0.98
CMK2YOL016C SPT2P06843 333 aaPredicted RBP8.93□□□□□ -0.98
CMK2YOL016C RPN1P38764 993 aaKnown RBP8.93□□□□□ -0.98
CMK2YOL016C TOA1P32773 286 aa8.92□□□□□ -0.98
CMK2YOL016C ENP1P38333 483 aaKnown RBP8.92□□□□□ -0.98
CMK2YOL016C ASF1P32447 279 aa8.91□□□□□ -0.98
CMK2YOL016C LEU3P08638 886 aa8.9□□□□□ -0.98
CMK2YOL016C ENV11P53246 860 aa8.89□□□□□ -0.99
CMK2YOL016C SPA2P23201 1466 aaKnown RBP8.88□□□□□ -0.99
CMK2YOL016C NSR1P27476 414 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
CMK2YOL016C FUN12P39730 1002 aaKnown RBP8.84□□□□□ -0.99
CMK2YOL016C SWR1Q05471 1514 aa8.83□□□□□ -1
CMK2YOL016C RNA1P11745 407 aaKnown RBP8.81□□□□□ -1
CMK2YOL016C SWE1P32944 819 aa8.8□□□□□ -1
CMK2YOL016C SPT16P32558 1035 aaKnown RBP8.79□□□□□ -1
CMK2YOL016C TLG1Q03322 224 aa8.79□□□□□ -1
CMK2YOL016C SPT7P35177 1332 aa8.77□□□□□ -1.01
CMK2YOL016C NHA1Q99271 985 aa8.77□□□□□ -1.01
CMK2YOL016C MPP10P47083 593 aaKnown RBP8.76□□□□□ -1.01
CMK2YOL016C PIL1P53252 339 aaKnown RBP8.75□□□□□ -1.01
CMK2YOL016C DMA2P53924 522 aa8.75□□□□□ -1.01
CMK2YOL016C FPR4Q06205 392 aaPredicted RBP8.74□□□□□ -1.01
CMK2YOL016C BRN1P38170 754 aa8.73□□□□□ -1.01
CMK2YOL016C NAB3P38996 802 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
CMK2YOL016C HSC82P15108 705 aaKnown RBP8.7□□□□□ -1.02
CMK2YOL016C TIF4632P39936 914 aaKnown RBP8.7□□□□□ -1.02
CMK2YOL016C OSW7P43611 510 aa8.7□□□□□ -1.02
CMK2YOL016C YTA7P40340 1379 aa8.69□□□□□ -1.02
CMK2YOL016C RPL17AP05740 184 aaKnown RBP8.69□□□□□ -1.02
CMK2YOL016C RPL17BP46990 184 aaKnown RBP8.69□□□□□ -1.02
CMK2YOL016C YGR130CP53278 816 aa8.69□□□□□ -1.02
CMK2YOL016C MRPL32P25348 183 aa8.68□□□□□ -1.02
CMK2YOL016C NMD2P38798 1089 aaKnown RBP8.68□□□□□ -1.02
CMK2YOL016C RTS3P53289 263 aa8.68□□□□□ -1.02
CMK2YOL016C SSA1P10591 642 aaKnown RBP8.67□□□□□ -1.02
CMK2YOL016C SSA2P10592 639 aaKnown RBP8.67□□□□□ -1.02
CMK2YOL016C YNL011CP53980 444 aa8.67□□□□□ -1.02
CMK2YOL016C PET111P08468 800 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms