RNA–Protein interactions for RNA: HRA1

HRA1, Non-protein-coding RNA, yeastyeast

Gene HRA1, Length 564 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRA1HRA1 INO80P53115 1489 aa17.24■□□□□ 0.35
HRA1HRA1 MON2P48563 1636 aaPredicted RBP17.14■□□□□ 0.33
HRA1HRA1 DNA2P38859 1522 aa16.37■□□□□ 0.21
HRA1HRA1 SWR1Q05471 1514 aa16.24■□□□□ 0.19
HRA1HRA1 KOG1P38873 1557 aa16.1■□□□□ 0.17
HRA1HRA1 TCB3Q03640 1545 aaKnown RBP16.04■□□□□ 0.16
HRA1HRA1 RSE1Q04693 1361 aaKnown RBP16■□□□□ 0.15
HRA1HRA1 TY1B-DR4Q07793 1604 aa15.93■□□□□ 0.14
HRA1HRA1 SGS1P35187 1447 aa15.67■□□□□ 0.1
HRA1HRA1 SPT6P23615 1451 aaKnown RBP15.4■□□□□ 0.06
HRA1HRA1 HSL1P34244 1518 aa15.37■□□□□ 0.05
HRA1HRA1 SPA2P23201 1466 aaKnown RBP15.29■□□□□ 0.04
HRA1HRA1 ECM5Q03214 1411 aa15.23■□□□□ 0.03
HRA1HRA1 MTC1P47018 478 aaKnown RBP15.19■□□□□ 0.02
HRA1HRA1 BUD4P47136 1447 aa15.05■□□□□ -0
HRA1HRA1 HIR3P47171 1648 aa15.03■□□□□ -0
HRA1HRA1 THO2P53552 1597 aaKnown RBP14.99□□□□□ -0.01
HRA1HRA1 MDS3P53094 1487 aa14.89□□□□□ -0.03
HRA1HRA1 XRN1P22147 1528 aaKnown RBP14.75□□□□□ -0.05
HRA1HRA1 REV3P14284 1504 aa14.69□□□□□ -0.06
HRA1HRA1 PEP1P32319 1579 aa14.67□□□□□ -0.06
HRA1HRA1 BPT1P14772 1559 aa14.55□□□□□ -0.08
HRA1HRA1 ATG2P53855 1592 aa14.52□□□□□ -0.08
HRA1HRA1 SKI3P17883 1432 aaKnown RBP14.38□□□□□ -0.11
HRA1HRA1 TAF2P23255 1407 aa14.34□□□□□ -0.11
HRA1HRA1 YCF1P39109 1515 aaKnown RBP14.28□□□□□ -0.12
HRA1HRA1 SSN2P38931 1420 aa14.25□□□□□ -0.13
HRA1HRA1 SSK2P53599 1579 aa14.22□□□□□ -0.13
HRA1HRA1 SIN3P22579 1536 aa14.2□□□□□ -0.14
HRA1HRA1 UFD4P33202 1483 aa14.11□□□□□ -0.15
HRA1HRA1 MIF2P35201 549 aa14.09□□□□□ -0.15
HRA1HRA1 ESP1Q03018 1630 aa14.02□□□□□ -0.16
HRA1HRA1 MET5P47169 1442 aa13.95□□□□□ -0.18
HRA1HRA1 RQC2Q12532 1038 aaKnown RBP13.93□□□□□ -0.18
HRA1HRA1 SCC2Q04002 1493 aa13.93□□□□□ -0.18
HRA1HRA1 CHD1P32657 1468 aa13.91□□□□□ -0.18
HRA1HRA1 YPK9Q12697 1472 aa13.91□□□□□ -0.18
HRA1HRA1 DRS1P32892 752 aaKnown RBP13.89□□□□□ -0.19
HRA1HRA1 CDC25P04821 1589 aa13.87□□□□□ -0.19
HRA1HRA1 LTE1P07866 1435 aa13.86□□□□□ -0.19
HRA1HRA1 RPO31P04051 1460 aa13.85□□□□□ -0.19
HRA1HRA1 MYO2P19524 1574 aaKnown RBP13.83□□□□□ -0.19
HRA1HRA1 DNF1P32660 1571 aa13.83□□□□□ -0.19
HRA1HRA1 ESC1Q03661 1658 aaKnown RBP13.79□□□□□ -0.2
HRA1HRA1 PAN1P32521 1480 aa13.75□□□□□ -0.21
HRA1HRA1 RKR1Q04781 1562 aa13.74□□□□□ -0.21
HRA1HRA1 RPA190P10964 1664 aaKnown RBP13.7□□□□□ -0.22
HRA1HRA1 ITT1Q04638 464 aa13.7□□□□□ -0.22
HRA1HRA1 ABP1P15891 592 aaKnown RBP13.69□□□□□ -0.22
HRA1HRA1 TY2B-LR1P0C2J3 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-FP0CX63 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-GR2P0CX64 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-CP25384 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-DR2Q03494 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY1B-DR1Q03855 1755 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-DR3Q07791 1770 aaKnown RBP13.68□□□□□ -0.22
HRA1HRA1 TY2B-OR1Q12113 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-DR1Q12472 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY2B-OR2Q12501 1770 aa13.68□□□□□ -0.22
HRA1HRA1 TY1B-BRQ12193 1756 aa13.66□□□□□ -0.22
HRA1HRA1 TY1B-GR3Q12316 1755 aa13.66□□□□□ -0.22
HRA1HRA1 TY1B-ORQ92393 1755 aa13.66□□□□□ -0.22
HRA1HRA1 GEA2P39993 1459 aaKnown RBP13.66□□□□□ -0.22
HRA1HRA1 BNI1P41832 1953 aa13.65□□□□□ -0.22
HRA1HRA1 TOP2P06786 1428 aaKnown RBP13.62□□□□□ -0.23
HRA1HRA1 YFR006WP43590 535 aa13.6□□□□□ -0.23
HRA1HRA1 TRM732Q03496 1420 aa13.56□□□□□ -0.24
HRA1HRA1 MMS22Q06164 1454 aa13.56□□□□□ -0.24
HRA1HRA1 MMS1Q06211 1407 aa13.54□□□□□ -0.24
HRA1HRA1 TY1B-HO13535 1793 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-DR5P0C2I2 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-DR6P0C2I3 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-LR2P0C2I5 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-LR3P0C2I6 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY1B-PR1P0C2I9 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY1B-PR2P0C2J0 1756 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-PR3P0C2J1 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY1B-JR1P47098 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-ML2Q03434 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY1B-ER1Q03612 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-ML1Q04711 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY1B-GR2Q12269 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-OLQ12273 1755 aa13.5□□□□□ -0.25
HRA1HRA1 TY1B-PLQ12414 1755 aaKnown RBP13.5□□□□□ -0.25
HRA1HRA1 TY2B-BQ12491 1770 aa13.49□□□□□ -0.25
HRA1HRA1 DRS2P39524 1355 aa13.46□□□□□ -0.25
HRA1HRA1 TY1B-DR3Q99231 1755 aa13.43□□□□□ -0.26
HRA1HRA1 NUP159P40477 1460 aa13.42□□□□□ -0.26
HRA1HRA1 VPS15P22219 1454 aa13.38□□□□□ -0.27
HRA1HRA1 SPP41P38904 1435 aa13.36□□□□□ -0.27
HRA1HRA1 POL1P13382 1468 aa13.36□□□□□ -0.27
HRA1HRA1 YRF1-1P0CX20 1796 aa13.35□□□□□ -0.27
HRA1HRA1 YRF1-5P0CX21 1796 aa13.35□□□□□ -0.27
HRA1HRA1 YRF1-8P0CX22 1796 aa13.35□□□□□ -0.27
HRA1HRA1 SMC4Q12267 1418 aa13.35□□□□□ -0.27
HRA1HRA1 YOR1P53049 1477 aa13.29□□□□□ -0.28
HRA1HRA1 TSC11P40061 1430 aa13.27□□□□□ -0.29
HRA1HRA1 IRC20Q06554 1556 aa13.27□□□□□ -0.29
HRA1HRA1 STU1P38198 1513 aa13.25□□□□□ -0.29
HRA1HRA1 NTE1Q04958 1679 aa13.22□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms