Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 YML009W-BYML009W-B 477 nt15.69■□□□□ 0.1
TDA4P47153 NSR1YGR159C 1245 nt15.66■□□□□ 0.1
TDA4P47153 NOP1YDL014W 984 nt15.28■□□□□ 0.04
TDA4P47153 MDJ1YFL016C 1536 nt14.1□□□□□ -0.15
TDA4P47153 YKL036CYKL036C 393 nt14.01□□□□□ -0.17
TDA4P47153 Q0297Q0297 156 nt13.32□□□□□ -0.28
TDA4P47153 SRX1YKL086W 384 nt13.32□□□□□ -0.28
TDA4P47153 YJL027CYJL027C 417 nt13.06□□□□□ -0.32
TDA4P47153 SCS3YGL126W 1143 nt12.68□□□□□ -0.38
TDA4P47153 YCR051WYCR051W 669 nt12.63□□□□□ -0.39
TDA4P47153 DBP2YNL112W 1641 nt12.29□□□□□ -0.44
TDA4P47153 YBR190WYBR190W 312 nt12.24□□□□□ -0.45
TDA4P47153 SSA3YBL075C 1950 nt12.19□□□□□ -0.46
TDA4P47153 YOL085CYOL085C 342 nt12.11□□□□□ -0.47
TDA4P47153 TRN1tP(UGG)A 72 nt12.06□□□□□ -0.48
TDA4P47153 SUF9tP(UGG)F 72 nt12.06□□□□□ -0.48
TDA4P47153 SUF8tP(UGG)H 72 nt12.06□□□□□ -0.48
TDA4P47153 tP(UGG)LtP(UGG)L 72 nt12.06□□□□□ -0.48
TDA4P47153 SUF7tP(UGG)M 72 nt12.06□□□□□ -0.48
TDA4P47153 tP(UGG)N1tP(UGG)N1 72 nt12.06□□□□□ -0.48
TDA4P47153 tP(UGG)N2tP(UGG)N2 72 nt12.06□□□□□ -0.48
TDA4P47153 tP(UGG)O1tP(UGG)O1 72 nt12.06□□□□□ -0.48
TDA4P47153 SUF11tP(UGG)O2 72 nt12.06□□□□□ -0.48
TDA4P47153 RPP1BYDL130W 321 nt11.95□□□□□ -0.5
TDA4P47153 CCC1YLR220W 969 nt11.93□□□□□ -0.5
TDA4P47153 PKP1YIL042C 1185 nt11.91□□□□□ -0.5
TDA4P47153 RTC3YHR087W 336 nt11.86□□□□□ -0.51
TDA4P47153 RVS167YDR388W 1449 nt11.62□□□□□ -0.55
TDA4P47153 PUT4YOR348C 1884 nt11.55□□□□□ -0.56
TDA4P47153 SCJ1YMR214W 1134 nt11.47□□□□□ -0.57
TDA4P47153 PET122YER153C 765 nt11.39□□□□□ -0.59
TDA4P47153 tP(UGG)O3tP(UGG)O3 72 nt11.39□□□□□ -0.59
TDA4P47153 ATS1YAL020C 1002 nt11.33□□□□□ -0.6
TDA4P47153 SCR1SCR1 522 nt11.32□□□□□ -0.6
TDA4P47153 SHR5YOL110W 714 nt11.17□□□□□ -0.62
TDA4P47153 ARE1YCR048W 1833 nt11.14□□□□□ -0.63
TDA4P47153 POA1YBR022W 534 nt11.09□□□□□ -0.63
TDA4P47153 RRN5YLR141W 1092 nt11.06□□□□□ -0.64
TDA4P47153 YDJ1YNL064C 1230 nt11.05□□□□□ -0.64
TDA4P47153 YHR049C-AYHR049C-A 297 nt10.98□□□□□ -0.65
TDA4P47153 BSC6YOL137W 1494 nt10.98□□□□□ -0.65
TDA4P47153 SPT5YML010W 3192 nt10.97□□□□□ -0.65
TDA4P47153 SAH1YER043C 1350 nt10.94□□□□□ -0.66
TDA4P47153 URN1YPR152C 1398 nt10.92□□□□□ -0.66
TDA4P47153 OPI9YLR338W 858 nt10.91□□□□□ -0.66
TDA4P47153 YER088W-BYER088W-B 147 nt10.85□□□□□ -0.67
TDA4P47153 DEP1YAL013W 1218 nt10.84□□□□□ -0.67
TDA4P47153 RSB1YOR049C 1065 nt10.84□□□□□ -0.67
TDA4P47153 SSA4YER103W 1929 nt10.82□□□□□ -0.68
TDA4P47153 GAR1YHR089C 618 nt10.78□□□□□ -0.68
TDA4P47153 RPN10YHR200W 807 nt10.78□□□□□ -0.68
TDA4P47153 YNL208WYNL208W 600 nt10.7□□□□□ -0.7
TDA4P47153 BUD23YCR047C 828 nt10.65□□□□□ -0.7
TDA4P47153 PUN1YLR414C 792 nt10.59□□□□□ -0.71
TDA4P47153 PTC2YER089C 1395 nt10.52□□□□□ -0.72
TDA4P47153 NAB2YGL122C 1578 nt10.5□□□□□ -0.73
TDA4P47153 PST2YDR032C 597 nt10.49□□□□□ -0.73
TDA4P47153 BDF1YLR399C 2061 nt10.48□□□□□ -0.73
TDA4P47153 TIR1YER011W 765 nt10.43□□□□□ -0.74
TDA4P47153 MEP2YNL142W 1500 nt10.39□□□□□ -0.75
TDA4P47153 YJR018WYJR018W 363 nt10.39□□□□□ -0.75
TDA4P47153 TAT1YBR069C 1860 nt10.34□□□□□ -0.75
TDA4P47153 FIS1YIL065C 468 nt10.29□□□□□ -0.76
TDA4P47153 SSA1YAL005C 1929 nt10.28□□□□□ -0.76
TDA4P47153 DAL1YIR027C 1383 nt10.25□□□□□ -0.77
TDA4P47153 RPP2BYDR382W 333 nt10.2□□□□□ -0.78
TDA4P47153 DCW1YKL046C 1350 nt10.17□□□□□ -0.78
TDA4P47153 YPS1YLR120C 1710 nt10.16□□□□□ -0.78
TDA4P47153 YJR120WYJR120W 351 nt10.16□□□□□ -0.78
TDA4P47153 PHO4YFR034C 939 nt10.15□□□□□ -0.78
TDA4P47153 FPR4YLR449W 1179 nt10.14□□□□□ -0.79
TDA4P47153 INM2YDR287W 879 nt10.12□□□□□ -0.79
TDA4P47153 YKL097CYKL097C 411 nt10.08□□□□□ -0.8
TDA4P47153 YBR220CYBR220C 1683 nt10.08□□□□□ -0.8
TDA4P47153 SHU1YHL006C 453 nt10.07□□□□□ -0.8
TDA4P47153 PAC11YDR488C 1602 nt10.07□□□□□ -0.8
TDA4P47153 YHR165W-AYHR165W-A 312 nt10.05□□□□□ -0.8
TDA4P47153 EMI2YDR516C 1503 nt10.04□□□□□ -0.8
TDA4P47153 SRB2YHR041C 633 nt10.04□□□□□ -0.8
TDA4P47153 YMR090WYMR090W 684 nt10.04□□□□□ -0.8
TDA4P47153 YDR095CYDR095C 411 nt10.02□□□□□ -0.81
TDA4P47153 YJL225CYJL225C 5277 nt9.98□□□□□ -0.81
TDA4P47153 BDH2YAL061W 1254 nt9.95□□□□□ -0.82
TDA4P47153 YDL221WYDL221W 552 nt9.94□□□□□ -0.82
TDA4P47153 WWM1YFL010C 636 nt9.94□□□□□ -0.82
TDA4P47153 YGR021WYGR021W 873 nt9.93□□□□□ -0.82
TDA4P47153 SDH1YKL148C 1923 nt9.93□□□□□ -0.82
TDA4P47153 YAL037C-BYAL037C-B 975 nt9.92□□□□□ -0.82
TDA4P47153 YBL100CYBL100C 315 nt9.92□□□□□ -0.82
TDA4P47153 RDN37-1RDN37-1 5354 nt9.85□□□□□ -0.83
TDA4P47153 RDN37-2RDN37-2 5354 nt9.85□□□□□ -0.83
TDA4P47153 PCH2YBR186W 1695 nt9.84□□□□□ -0.83
TDA4P47153 CAC2YML102W 1407 nt9.84□□□□□ -0.83
TDA4P47153 PTP1YDL230W 1008 nt9.84□□□□□ -0.83
TDA4P47153 YFL021C-AYFL021C-A 855 nt9.83□□□□□ -0.84
TDA4P47153 SEC11YIR022W 504 nt9.83□□□□□ -0.84
TDA4P47153 HOM6YJR139C 1080 nt9.83□□□□□ -0.84
TDA4P47153 LSM3YLR438C-A 270 nt9.83□□□□□ -0.84
TDA4P47153 GUT2YIL155C 1950 nt9.81□□□□□ -0.84
TDA4P47153 RPP2AYOL039W 321 nt9.81□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms