RNA–Protein interactions for RNA: YDR260C

SWM1, Transcript of Subunit of the anaphase-promoting complex (APC), yeastyeast

Gene SWM1, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM1YDR260C INO80P53115 1489 aa17.42■□□□□ 0.38
SWM1YDR260C MON2P48563 1636 aaPredicted RBP17.36■□□□□ 0.37
SWM1YDR260C DNA2P38859 1522 aa16.61■□□□□ 0.25
SWM1YDR260C SWR1Q05471 1514 aa16.58■□□□□ 0.24
SWM1YDR260C TCB3Q03640 1545 aaKnown RBP16.39■□□□□ 0.21
SWM1YDR260C TY1B-DR4Q07793 1604 aa16.37■□□□□ 0.21
SWM1YDR260C KOG1P38873 1557 aa16.3■□□□□ 0.2
SWM1YDR260C SGS1P35187 1447 aa16.19■□□□□ 0.18
SWM1YDR260C RSE1Q04693 1361 aaKnown RBP16.04■□□□□ 0.16
SWM1YDR260C HSL1P34244 1518 aa15.85■□□□□ 0.13
SWM1YDR260C SPT6P23615 1451 aaKnown RBP15.84■□□□□ 0.13
SWM1YDR260C SPA2P23201 1466 aaKnown RBP15.72■□□□□ 0.11
SWM1YDR260C ECM5Q03214 1411 aa15.52■□□□□ 0.08
SWM1YDR260C HIR3P47171 1648 aa15.51■□□□□ 0.07
SWM1YDR260C MTC1P47018 478 aaKnown RBP15.38■□□□□ 0.05
SWM1YDR260C BUD4P47136 1447 aa15.36■□□□□ 0.05
SWM1YDR260C THO2P53552 1597 aaKnown RBP15.32■□□□□ 0.04
SWM1YDR260C XRN1P22147 1528 aaKnown RBP15.25■□□□□ 0.03
SWM1YDR260C MDS3P53094 1487 aa15.24■□□□□ 0.03
SWM1YDR260C PEP1P32319 1579 aa15.03■□□□□ -0
SWM1YDR260C ATG2P53855 1592 aa14.97□□□□□ -0.01
SWM1YDR260C REV3P14284 1504 aa14.94□□□□□ -0.02
SWM1YDR260C TAF2P23255 1407 aa14.92□□□□□ -0.02
SWM1YDR260C SSN2P38931 1420 aa14.91□□□□□ -0.02
SWM1YDR260C BPT1P14772 1559 aa14.85□□□□□ -0.03
SWM1YDR260C SKI3P17883 1432 aaKnown RBP14.83□□□□□ -0.04
SWM1YDR260C SIN3P22579 1536 aa14.66□□□□□ -0.06
SWM1YDR260C SSK2P53599 1579 aa14.59□□□□□ -0.07
SWM1YDR260C YCF1P39109 1515 aaKnown RBP14.58□□□□□ -0.08
SWM1YDR260C ESP1Q03018 1630 aa14.54□□□□□ -0.08
SWM1YDR260C UFD4P33202 1483 aa14.5□□□□□ -0.09
SWM1YDR260C DRS1P32892 752 aaKnown RBP14.44□□□□□ -0.1
SWM1YDR260C SCC2Q04002 1493 aa14.37□□□□□ -0.11
SWM1YDR260C RQC2Q12532 1038 aaKnown RBP14.35□□□□□ -0.11
SWM1YDR260C YPK9Q12697 1472 aa14.31□□□□□ -0.12
SWM1YDR260C MYO2P19524 1574 aaKnown RBP14.3□□□□□ -0.12
SWM1YDR260C CDC25P04821 1589 aa14.24□□□□□ -0.13
SWM1YDR260C RPO31P04051 1460 aa14.23□□□□□ -0.13
SWM1YDR260C CHD1P32657 1468 aa14.23□□□□□ -0.13
SWM1YDR260C ESC1Q03661 1658 aaKnown RBP14.23□□□□□ -0.13
SWM1YDR260C DNF1P32660 1571 aa14.22□□□□□ -0.13
SWM1YDR260C TY2B-LR1P0C2J3 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-FP0CX63 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-GR2P0CX64 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-CP25384 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-DR2Q03494 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY1B-DR1Q03855 1755 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-DR3Q07791 1770 aaKnown RBP14.21□□□□□ -0.13
SWM1YDR260C TY2B-OR1Q12113 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-DR1Q12472 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY2B-OR2Q12501 1770 aa14.21□□□□□ -0.13
SWM1YDR260C TY1B-BRQ12193 1756 aa14.14□□□□□ -0.15
SWM1YDR260C TY1B-GR3Q12316 1755 aa14.14□□□□□ -0.15
SWM1YDR260C TY1B-ORQ92393 1755 aa14.14□□□□□ -0.15
SWM1YDR260C PAN1P32521 1480 aa14.08□□□□□ -0.16
SWM1YDR260C MET5P47169 1442 aa14.07□□□□□ -0.16
SWM1YDR260C RKR1Q04781 1562 aa14.05□□□□□ -0.16
SWM1YDR260C TY2B-BQ12491 1770 aa14.02□□□□□ -0.16
SWM1YDR260C RPA190P10964 1664 aaKnown RBP14.02□□□□□ -0.16
SWM1YDR260C TOP2P06786 1428 aaKnown RBP13.99□□□□□ -0.17
SWM1YDR260C TY1B-DR3Q99231 1755 aa13.99□□□□□ -0.17
SWM1YDR260C TY1B-HO13535 1793 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-DR5P0C2I2 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-DR6P0C2I3 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-LR2P0C2I5 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-LR3P0C2I6 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C TY1B-PR1P0C2I9 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C TY1B-PR2P0C2J0 1756 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-PR3P0C2J1 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C TY1B-JR1P47098 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-ML2Q03434 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C TY1B-ER1Q03612 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-ML1Q04711 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C TY1B-GR2Q12269 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-OLQ12273 1755 aa13.98□□□□□ -0.17
SWM1YDR260C TY1B-PLQ12414 1755 aaKnown RBP13.98□□□□□ -0.17
SWM1YDR260C LTE1P07866 1435 aa13.98□□□□□ -0.17
SWM1YDR260C MMS22Q06164 1454 aa13.95□□□□□ -0.18
SWM1YDR260C MIF2P35201 549 aa13.94□□□□□ -0.18
SWM1YDR260C TRM732Q03496 1420 aa13.9□□□□□ -0.19
SWM1YDR260C BNI1P41832 1953 aa13.88□□□□□ -0.19
SWM1YDR260C ITT1Q04638 464 aa13.87□□□□□ -0.19
SWM1YDR260C POL1P13382 1468 aa13.85□□□□□ -0.19
SWM1YDR260C GEA2P39993 1459 aaKnown RBP13.85□□□□□ -0.19
SWM1YDR260C STU1P38198 1513 aa13.83□□□□□ -0.2
SWM1YDR260C YOR1P53049 1477 aa13.78□□□□□ -0.2
SWM1YDR260C SPP41P38904 1435 aa13.77□□□□□ -0.21
SWM1YDR260C NUP159P40477 1460 aa13.76□□□□□ -0.21
SWM1YDR260C ABP1P15891 592 aaKnown RBP13.76□□□□□ -0.21
SWM1YDR260C YRF1-1P0CX20 1796 aa13.76□□□□□ -0.21
SWM1YDR260C YRF1-5P0CX21 1796 aa13.76□□□□□ -0.21
SWM1YDR260C YRF1-8P0CX22 1796 aa13.76□□□□□ -0.21
SWM1YDR260C SMC4Q12267 1418 aa13.75□□□□□ -0.21
SWM1YDR260C MMS1Q06211 1407 aa13.72□□□□□ -0.21
SWM1YDR260C VPS15P22219 1454 aa13.7□□□□□ -0.22
SWM1YDR260C TY1B-JR2P47100 1755 aaKnown RBP13.7□□□□□ -0.22
SWM1YDR260C TY1B-ER2Q03619 1755 aa13.7□□□□□ -0.22
SWM1YDR260C TY1B-MR1Q04214 1755 aa13.7□□□□□ -0.22
SWM1YDR260C TY1B-MR2Q04670 1755 aaKnown RBP13.7□□□□□ -0.22
SWM1YDR260C TY1B-LR1Q12088 1755 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms