Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.42■■□□□ 1.34
SH3D21A4FU49 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
SH3D21A4FU49 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
SH3D21A4FU49 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SH3D21A4FU49 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SH3D21A4FU49 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SH3D21A4FU49 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SH3D21A4FU49 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.41■■□□□ 1.34
SH3D21A4FU49 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.4■■□□□ 1.34
SH3D21A4FU49 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SH3D21A4FU49 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SH3D21A4FU49 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SH3D21A4FU49 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.4■■□□□ 1.34
SH3D21A4FU49 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SH3D21A4FU49 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.38■■□□□ 1.33
SH3D21A4FU49 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3D21A4FU49 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3D21A4FU49 AC108673.1-201ENST00000510422 1159 ntBASIC23.38■■□□□ 1.33
SH3D21A4FU49 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3D21A4FU49 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SH3D21A4FU49 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3D21A4FU49 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SH3D21A4FU49 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.36■■□□□ 1.33
SH3D21A4FU49 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3D21A4FU49 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.36■■□□□ 1.33
SH3D21A4FU49 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3D21A4FU49 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SH3D21A4FU49 AP004833.2-201ENST00000532228 1454 ntBASIC23.36■■□□□ 1.33
SH3D21A4FU49 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3D21A4FU49 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 AC021231.2-201ENST00000594613 730 ntBASIC23.35■■□□□ 1.33
SH3D21A4FU49 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3D21A4FU49 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3D21A4FU49 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3D21A4FU49 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SH3D21A4FU49 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3D21A4FU49 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.33■■□□□ 1.33
SH3D21A4FU49 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH3D21A4FU49 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.33■■□□□ 1.33
SH3D21A4FU49 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SH3D21A4FU49 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3D21A4FU49 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.32■■□□□ 1.32
SH3D21A4FU49 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3D21A4FU49 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SH3D21A4FU49 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3D21A4FU49 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3D21A4FU49 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3D21A4FU49 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3D21A4FU49 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.31■■□□□ 1.32
SH3D21A4FU49 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SH3D21A4FU49 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3D21A4FU49 AC135731.1-201ENST00000569415 2548 ntBASIC23.31■■□□□ 1.32
SH3D21A4FU49 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH3D21A4FU49 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH3D21A4FU49 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3D21A4FU49 MIR6090-201ENST00000622481 60 ntBASIC23.3■■□□□ 1.32
SH3D21A4FU49 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3D21A4FU49 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3D21A4FU49 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SH3D21A4FU49 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3D21A4FU49 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.29■■□□□ 1.32
SH3D21A4FU49 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH3D21A4FU49 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3D21A4FU49 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3D21A4FU49 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3D21A4FU49 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SH3D21A4FU49 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.27■■□□□ 1.32
SH3D21A4FU49 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SH3D21A4FU49 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3D21A4FU49 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.26■■□□□ 1.31
SH3D21A4FU49 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3D21A4FU49 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3D21A4FU49 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3D21A4FU49 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
SH3D21A4FU49 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3D21A4FU49 LINC01003-201ENST00000564834 1764 ntBASIC23.25■■□□□ 1.31
SH3D21A4FU49 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3D21A4FU49 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3D21A4FU49 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3D21A4FU49 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SH3D21A4FU49 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.24■■□□□ 1.31
SH3D21A4FU49 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH3D21A4FU49 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.23■■□□□ 1.31
SH3D21A4FU49 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH3D21A4FU49 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.22■■□□□ 1.31
SH3D21A4FU49 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.22■■□□□ 1.31
SH3D21A4FU49 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SH3D21A4FU49 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SH3D21A4FU49 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SH3D21A4FU49 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.21■■□□□ 1.31
SH3D21A4FU49 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SH3D21A4FU49 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.21■■□□□ 1.31
SH3D21A4FU49 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH3D21A4FU49 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
SH3D21A4FU49 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH3D21A4FU49 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms