Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV6-4A0A1B0GX49 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-4A0A1B0GX49 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-4A0A1B0GX49 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-4A0A1B0GX49 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-4A0A1B0GX49 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-4A0A1B0GX49 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV6-4A0A1B0GX49 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-4A0A1B0GX49 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-4A0A1B0GX49 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV6-4A0A1B0GX49 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-4A0A1B0GX49 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV6-4A0A1B0GX49 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-4A0A1B0GX49 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV6-4A0A1B0GX49 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV6-4A0A1B0GX49 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV6-4A0A1B0GX49 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV6-4A0A1B0GX49 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV6-4A0A1B0GX49 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-4A0A1B0GX49 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-4A0A1B0GX49 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV6-4A0A1B0GX49 DUX4L29-201ENST00000425409 679 ntBASIC17.85■□□□□ 0.45
TRBV6-4A0A1B0GX49 AC018358.1-201ENST00000631079 1402 ntBASIC17.85■□□□□ 0.45
TRBV6-4A0A1B0GX49 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV6-4A0A1B0GX49 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-4A0A1B0GX49 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-4A0A1B0GX49 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-4A0A1B0GX49 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-4A0A1B0GX49 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-4A0A1B0GX49 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-4A0A1B0GX49 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRBV6-4A0A1B0GX49 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV6-4A0A1B0GX49 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV6-4A0A1B0GX49 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV6-4A0A1B0GX49 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV6-4A0A1B0GX49 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 AC021231.2-201ENST00000594613 730 ntBASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-4A0A1B0GX49 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-4A0A1B0GX49 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV6-4A0A1B0GX49 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-4A0A1B0GX49 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-4A0A1B0GX49 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-4A0A1B0GX49 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 AL121749.1-202ENST00000609313 2153 ntBASIC17.8■□□□□ 0.44
TRBV6-4A0A1B0GX49 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-4A0A1B0GX49 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-4A0A1B0GX49 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRBV6-4A0A1B0GX49 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
TRBV6-4A0A1B0GX49 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRBV6-4A0A1B0GX49 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.78■□□□□ 0.44
TRBV6-4A0A1B0GX49 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV6-4A0A1B0GX49 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV6-4A0A1B0GX49 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-4A0A1B0GX49 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-4A0A1B0GX49 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-4A0A1B0GX49 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-4A0A1B0GX49 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-4A0A1B0GX49 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 RPS2P35-201ENST00000443417 897 ntBASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 AC110285.7-201ENST00000624417 1536 ntBASIC17.76■□□□□ 0.43
TRBV6-4A0A1B0GX49 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-4A0A1B0GX49 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-4A0A1B0GX49 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-4A0A1B0GX49 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-4A0A1B0GX49 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-4A0A1B0GX49 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms