Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KRTAP3-3Q9BYR6 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 AC036108.4-201ENST00000611654 2516 ntBASIC4.09□□□□□ -1.76
KRTAP3-3Q9BYR6 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 LPP-208ENST00000448637 5835 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 STAG3L4-201ENST00000352103 530 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SNORA25.6-201ENST00000364121 118 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 RNU6-283P-201ENST00000364788 107 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 RNU6-424P-201ENST00000384367 105 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SNORD56.6-201ENST00000384569 71 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 MIR1267-201ENST00000408723 78 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 RNA5SP113-201ENST00000410486 84 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 TRGVA-201ENST00000413819 285 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 CYP2C58P-201ENST00000436281 475 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC245291.3-201ENST00000443400 292 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 RN7SL751P-201ENST00000473281 284 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 IGLV10-67-201ENST00000519446 325 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC104996.3-201ENST00000590718 94 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC092723.1-201ENST00000599411 474 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC009053.4-201ENST00000614366 108 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 FAM238C-205ENST00000640641 391 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AL591543.1-202ENST00000642095 4149 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 AC018809.2-201ENST00000602436 3823 ntBASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.08□□□□□ -1.76
KRTAP3-3Q9BYR6 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 AP000542.3-201ENST00000623391 6114 ntBASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 HSBP1P2-201ENST00000299671 229 ntBASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 SNORD114-10-201ENST00000363409 72 ntBASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 SNORA30-201ENST00000384028 129 ntBASIC4.07□□□□□ -1.76
KRTAP3-3Q9BYR6 RNU6-466P-201ENST00000391224 103 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms