RNA–Protein interactions for RNA: ENST00000638991.1

KCNMA1-248, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 11,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-248ENST00000638991 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
KCNMA1-248ENST00000638991 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
KCNMA1-248ENST00000638991 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
KCNMA1-248ENST00000638991 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
KCNMA1-248ENST00000638991 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
KCNMA1-248ENST00000638991 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
KCNMA1-248ENST00000638991 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
KCNMA1-248ENST00000638991 PCGF6Q9BYE7 350 aa13.92□□□□□ -0.18
KCNMA1-248ENST00000638991 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
KCNMA1-248ENST00000638991 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
KCNMA1-248ENST00000638991 APLP2Q06481 763 aa13.73□□□□□ -0.21
KCNMA1-248ENST00000638991 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-248ENST00000638991 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-248ENST00000638991 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
KCNMA1-248ENST00000638991 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-248ENST00000638991 CCER1Q8TC90 406 aaPredicted RBP13.49□□□□□ -0.25
KCNMA1-248ENST00000638991 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
KCNMA1-248ENST00000638991 MYT1Q01538 1121 aa13.43□□□□□ -0.26
KCNMA1-248ENST00000638991 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
KCNMA1-248ENST00000638991 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-248ENST00000638991 HRCP23327 699 aa13.39□□□□□ -0.27
KCNMA1-248ENST00000638991 NEFLP07196 543 aa13.28□□□□□ -0.28
KCNMA1-248ENST00000638991 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
KCNMA1-248ENST00000638991 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
KCNMA1-248ENST00000638991 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
KCNMA1-248ENST00000638991 CHIC1Q5VXU3 224 aa13.12□□□□□ -0.31
KCNMA1-248ENST00000638991 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
KCNMA1-248ENST00000638991 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
KCNMA1-248ENST00000638991 ITGAEP38570 1179 aa13.03□□□□□ -0.32
KCNMA1-248ENST00000638991 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-248ENST00000638991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-248ENST00000638991 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-248ENST00000638991 BCANQ96GW7 911 aa12.82□□□□□ -0.36
KCNMA1-248ENST00000638991 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
KCNMA1-248ENST00000638991 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
KCNMA1-248ENST00000638991 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
KCNMA1-248ENST00000638991 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-248ENST00000638991 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
KCNMA1-248ENST00000638991 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-248ENST00000638991 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
KCNMA1-248ENST00000638991 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
KCNMA1-248ENST00000638991 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-248ENST00000638991 NEUROD1Q13562 356 aa12.5□□□□□ -0.41
KCNMA1-248ENST00000638991 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
KCNMA1-248ENST00000638991 ANP32CO43423 234 aa12.47□□□□□ -0.41
KCNMA1-248ENST00000638991 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
KCNMA1-248ENST00000638991 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-248ENST00000638991 ZNF326Q5BKZ1 582 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-248ENST00000638991 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
KCNMA1-248ENST00000638991 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
KCNMA1-248ENST00000638991 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
KCNMA1-248ENST00000638991 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-248ENST00000638991 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
KCNMA1-248ENST00000638991 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
KCNMA1-248ENST00000638991 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
KCNMA1-248ENST00000638991 ANP32AP39687 249 aaKnown RBP12.26□□□□□ -0.45
KCNMA1-248ENST00000638991 ABCC9O60706 1549 aa12.26□□□□□ -0.45
KCNMA1-248ENST00000638991 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
KCNMA1-248ENST00000638991 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
KCNMA1-248ENST00000638991 SENP3-EIF4A1A0A087X0R7 540 aa12.22□□□□□ -0.45
KCNMA1-248ENST00000638991 FKBP8Q14318 412 aa12.22□□□□□ -0.45
KCNMA1-248ENST00000638991 ARXQ96QS3 562 aa12.19□□□□□ -0.46
KCNMA1-248ENST00000638991 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-248ENST00000638991 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
KCNMA1-248ENST00000638991 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
KCNMA1-248ENST00000638991 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-248ENST00000638991 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-248ENST00000638991 TONSLQ96HA7 1378 aa12.13□□□□□ -0.47
KCNMA1-248ENST00000638991 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-248ENST00000638991 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
KCNMA1-248ENST00000638991 MIER1Q8N108 512 aa12.12□□□□□ -0.47
KCNMA1-248ENST00000638991 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
KCNMA1-248ENST00000638991 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
KCNMA1-248ENST00000638991 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
KCNMA1-248ENST00000638991 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
KCNMA1-248ENST00000638991 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
KCNMA1-248ENST00000638991 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
KCNMA1-248ENST00000638991 FBLN2P98095 1184 aa12.08□□□□□ -0.48
KCNMA1-248ENST00000638991 NBR1Q14596 966 aa12.07□□□□□ -0.48
KCNMA1-248ENST00000638991 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
KCNMA1-248ENST00000638991 CCDC136Q96JN2 1154 aa12.01□□□□□ -0.49
KCNMA1-248ENST00000638991 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
KCNMA1-248ENST00000638991 HIRIP3Q9BW71 556 aaPredicted RBP11.99□□□□□ -0.49
KCNMA1-248ENST00000638991 CLIP1P30622 1438 aa11.99□□□□□ -0.49
KCNMA1-248ENST00000638991 MRS2Q9HD23 443 aa11.96□□□□□ -0.49
KCNMA1-248ENST00000638991 NEFMP07197 916 aa11.95□□□□□ -0.5
KCNMA1-248ENST00000638991 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
KCNMA1-248ENST00000638991 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-248ENST00000638991 ANP32BQ92688 251 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-248ENST00000638991 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-248ENST00000638991 UPF2Q9HAU5 1272 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-248ENST00000638991 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
KCNMA1-248ENST00000638991 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
KCNMA1-248ENST00000638991 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
KCNMA1-248ENST00000638991 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
KCNMA1-248ENST00000638991 GLIPR1L2Q4G1C9 344 aa11.86□□□□□ -0.51
KCNMA1-248ENST00000638991 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
KCNMA1-248ENST00000638991 A0A0G2JS52 829 aa11.85□□□□□ -0.51
KCNMA1-248ENST00000638991 EEA1Q15075 1411 aa11.85□□□□□ -0.51
KCNMA1-248ENST00000638991 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms