RNA–Protein interactions for RNA: ENST00000392952.7

ABLIM1-206, Transcript of actin binding LIM protein 1, humanhuman

TSL 5 BASIC

Gene ABLIM1, Length 6,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM1-206ENST00000392952 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
ABLIM1-206ENST00000392952 NISCHQ9Y2I1 1504 aa15.7■□□□□ 0.1
ABLIM1-206ENST00000392952 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
ABLIM1-206ENST00000392952 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
ABLIM1-206ENST00000392952 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
ABLIM1-206ENST00000392952 APLP2Q06481 763 aa14.12□□□□□ -0.15
ABLIM1-206ENST00000392952 FAM9AQ8IZU1 332 aaPredicted RBP14.01□□□□□ -0.17
ABLIM1-206ENST00000392952 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
ABLIM1-206ENST00000392952 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
ABLIM1-206ENST00000392952 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
ABLIM1-206ENST00000392952 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
ABLIM1-206ENST00000392952 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
ABLIM1-206ENST00000392952 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
ABLIM1-206ENST00000392952 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
ABLIM1-206ENST00000392952 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.23
ABLIM1-206ENST00000392952 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
ABLIM1-206ENST00000392952 ABCC9O60706 1549 aa13.42□□□□□ -0.26
ABLIM1-206ENST00000392952 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
ABLIM1-206ENST00000392952 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
ABLIM1-206ENST00000392952 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
ABLIM1-206ENST00000392952 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABLIM1-206ENST00000392952 PPARGC1BQ86YN6 1023 aaKnown RBP13.22□□□□□ -0.29
ABLIM1-206ENST00000392952 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
ABLIM1-206ENST00000392952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
ABLIM1-206ENST00000392952 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
ABLIM1-206ENST00000392952 ITGAEP38570 1179 aa13.09□□□□□ -0.31
ABLIM1-206ENST00000392952 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
ABLIM1-206ENST00000392952 NEFLP07196 543 aa13.06□□□□□ -0.32
ABLIM1-206ENST00000392952 HRCP23327 699 aa13.02□□□□□ -0.33
ABLIM1-206ENST00000392952 ZCCHC6Q5VYS8 1495 aaKnown RBP13□□□□□ -0.33
ABLIM1-206ENST00000392952 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
ABLIM1-206ENST00000392952 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
ABLIM1-206ENST00000392952 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
ABLIM1-206ENST00000392952 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
ABLIM1-206ENST00000392952 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
ABLIM1-206ENST00000392952 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
ABLIM1-206ENST00000392952 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
ABLIM1-206ENST00000392952 FBLN2P98095 1184 aa12.79□□□□□ -0.36
ABLIM1-206ENST00000392952 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
ABLIM1-206ENST00000392952 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
ABLIM1-206ENST00000392952 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
ABLIM1-206ENST00000392952 CDK11AQ9UQ88 783 aaPredicted RBP12.67□□□□□ -0.38
ABLIM1-206ENST00000392952 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
ABLIM1-206ENST00000392952 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
ABLIM1-206ENST00000392952 P3H3Q8IVL6 736 aa12.65□□□□□ -0.39
ABLIM1-206ENST00000392952 NACADO15069 1562 aa12.64□□□□□ -0.39
ABLIM1-206ENST00000392952 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
ABLIM1-206ENST00000392952 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
ABLIM1-206ENST00000392952 ANP32CO43423 234 aa12.53□□□□□ -0.4
ABLIM1-206ENST00000392952 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
ABLIM1-206ENST00000392952 ARID3CA6NKF2 412 aa12.52□□□□□ -0.4
ABLIM1-206ENST00000392952 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
ABLIM1-206ENST00000392952 MYT1Q01538 1121 aa12.51□□□□□ -0.41
ABLIM1-206ENST00000392952 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
ABLIM1-206ENST00000392952 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
ABLIM1-206ENST00000392952 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
ABLIM1-206ENST00000392952 EEA1Q15075 1411 aa12.46□□□□□ -0.41
ABLIM1-206ENST00000392952 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.42
ABLIM1-206ENST00000392952 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
ABLIM1-206ENST00000392952 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
ABLIM1-206ENST00000392952 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
ABLIM1-206ENST00000392952 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
ABLIM1-206ENST00000392952 CLIP1P30622 1438 aa12.37□□□□□ -0.43
ABLIM1-206ENST00000392952 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
ABLIM1-206ENST00000392952 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
ABLIM1-206ENST00000392952 WRNQ14191 1432 aaPredicted RBP eCLIP12.36□□□□□ -0.43
ABLIM1-206ENST00000392952 BCANQ96GW7 911 aa12.36□□□□□ -0.43
ABLIM1-206ENST00000392952 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
ABLIM1-206ENST00000392952 NEFMP07197 916 aa12.34□□□□□ -0.43
ABLIM1-206ENST00000392952 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
ABLIM1-206ENST00000392952 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
ABLIM1-206ENST00000392952 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
ABLIM1-206ENST00000392952 KIF27Q86VH2 1401 aa12.31□□□□□ -0.44
ABLIM1-206ENST00000392952 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
ABLIM1-206ENST00000392952 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
ABLIM1-206ENST00000392952 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.44
ABLIM1-206ENST00000392952 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
ABLIM1-206ENST00000392952 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
ABLIM1-206ENST00000392952 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
ABLIM1-206ENST00000392952 CEP164Q9UPV0 1460 aa12.25□□□□□ -0.45
ABLIM1-206ENST00000392952 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
ABLIM1-206ENST00000392952 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
ABLIM1-206ENST00000392952 PLEKHD1A6NEE1 506 aa12.23□□□□□ -0.45
ABLIM1-206ENST00000392952 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
ABLIM1-206ENST00000392952 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
ABLIM1-206ENST00000392952 RTL5Q5HYW3 569 aaPredicted RBP12.23□□□□□ -0.45
ABLIM1-206ENST00000392952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■□□□ 12.5
ABLIM1-206ENST00000392952 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
ABLIM1-206ENST00000392952 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
ABLIM1-206ENST00000392952 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
ABLIM1-206ENST00000392952 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
ABLIM1-206ENST00000392952 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
ABLIM1-206ENST00000392952 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
ABLIM1-206ENST00000392952 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
ABLIM1-206ENST00000392952 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
ABLIM1-206ENST00000392952 KDM2AQ9Y2K7 1162 aa12.1□□□□□ -0.47
ABLIM1-206ENST00000392952 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
ABLIM1-206ENST00000392952 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
ABLIM1-206ENST00000392952 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
ABLIM1-206ENST00000392952 CARMIL1Q5VZK9 1371 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 253.8 ms