RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
PCDH15-224ENST00000612394 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
PCDH15-224ENST00000612394 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
PCDH15-224ENST00000612394 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
PCDH15-224ENST00000612394 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
PCDH15-224ENST00000612394 APLP2Q06481 763 aa14.38□□□□□ -0.11
PCDH15-224ENST00000612394 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
PCDH15-224ENST00000612394 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
PCDH15-224ENST00000612394 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
PCDH15-224ENST00000612394 ZEB1P37275 1124 aaPredicted RBP13.87□□□□□ -0.19
PCDH15-224ENST00000612394 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
PCDH15-224ENST00000612394 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.21
PCDH15-224ENST00000612394 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
PCDH15-224ENST00000612394 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
PCDH15-224ENST00000612394 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
PCDH15-224ENST00000612394 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
PCDH15-224ENST00000612394 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
PCDH15-224ENST00000612394 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
PCDH15-224ENST00000612394 NEFLP07196 543 aa13.42□□□□□ -0.26
PCDH15-224ENST00000612394 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
PCDH15-224ENST00000612394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
PCDH15-224ENST00000612394 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
PCDH15-224ENST00000612394 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
PCDH15-224ENST00000612394 ABCC9O60706 1549 aa13.25□□□□□ -0.29
PCDH15-224ENST00000612394 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
PCDH15-224ENST00000612394 ITGAEP38570 1179 aa13.14□□□□□ -0.31
PCDH15-224ENST00000612394 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
PCDH15-224ENST00000612394 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
PCDH15-224ENST00000612394 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PCDH15-224ENST00000612394 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCDH15-224ENST00000612394 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
PCDH15-224ENST00000612394 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
PCDH15-224ENST00000612394 HRCP23327 699 aa13.01□□□□□ -0.33
PCDH15-224ENST00000612394 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
PCDH15-224ENST00000612394 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
PCDH15-224ENST00000612394 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
PCDH15-224ENST00000612394 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
PCDH15-224ENST00000612394 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
PCDH15-224ENST00000612394 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
PCDH15-224ENST00000612394 FBLN2P98095 1184 aa12.81□□□□□ -0.36
PCDH15-224ENST00000612394 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
PCDH15-224ENST00000612394 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
PCDH15-224ENST00000612394 DIEXFQ68CQ4 756 aaKnown RBP12.77□□□□□ -0.37
PCDH15-224ENST00000612394 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
PCDH15-224ENST00000612394 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
PCDH15-224ENST00000612394 ANP32CO43423 234 aa12.72□□□□□ -0.37
PCDH15-224ENST00000612394 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
PCDH15-224ENST00000612394 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
PCDH15-224ENST00000612394 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
PCDH15-224ENST00000612394 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
PCDH15-224ENST00000612394 NEFMP07197 916 aa12.67□□□□□ -0.38
PCDH15-224ENST00000612394 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
PCDH15-224ENST00000612394 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
PCDH15-224ENST00000612394 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-224ENST00000612394 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
PCDH15-224ENST00000612394 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDH15-224ENST00000612394 BCANQ96GW7 911 aa12.59□□□□□ -0.39
PCDH15-224ENST00000612394 P3H3Q8IVL6 736 aa12.58□□□□□ -0.39
PCDH15-224ENST00000612394 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
PCDH15-224ENST00000612394 NACADO15069 1562 aa12.56□□□□□ -0.4
PCDH15-224ENST00000612394 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
PCDH15-224ENST00000612394 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
PCDH15-224ENST00000612394 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 EEA1Q15075 1411 aa12.48□□□□□ -0.41
PCDH15-224ENST00000612394 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
PCDH15-224ENST00000612394 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
PCDH15-224ENST00000612394 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
PCDH15-224ENST00000612394 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
PCDH15-224ENST00000612394 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
PCDH15-224ENST00000612394 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
PCDH15-224ENST00000612394 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
PCDH15-224ENST00000612394 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
PCDH15-224ENST00000612394 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
PCDH15-224ENST00000612394 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
PCDH15-224ENST00000612394 CLIP1P30622 1438 aa12.35□□□□□ -0.43
PCDH15-224ENST00000612394 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
PCDH15-224ENST00000612394 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
PCDH15-224ENST00000612394 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
PCDH15-224ENST00000612394 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
PCDH15-224ENST00000612394 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
PCDH15-224ENST00000612394 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
PCDH15-224ENST00000612394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
PCDH15-224ENST00000612394 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
PCDH15-224ENST00000612394 CEP164Q9UPV0 1460 aa12.25□□□□□ -0.45
PCDH15-224ENST00000612394 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
PCDH15-224ENST00000612394 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
PCDH15-224ENST00000612394 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDH15-224ENST00000612394 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
PCDH15-224ENST00000612394 TMC1Q8TDI8 760 aa12.21□□□□□ -0.46
PCDH15-224ENST00000612394 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
PCDH15-224ENST00000612394 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
PCDH15-224ENST00000612394 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDH15-224ENST00000612394 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
PCDH15-224ENST00000612394 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
PCDH15-224ENST00000612394 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCDH15-224ENST00000612394 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
PCDH15-224ENST00000612394 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
PCDH15-224ENST00000612394 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms