RNA–Protein interactions for RNA: ENST00000367390.7

LHX9-203, Transcript of LIM homeobox 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LHX9, Length 7,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-203ENST00000367390 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
LHX9-203ENST00000367390 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
LHX9-203ENST00000367390 MYT1Q01538 1121 aa15.61■□□□□ 0.09
LHX9-203ENST00000367390 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
LHX9-203ENST00000367390 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
LHX9-203ENST00000367390 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
LHX9-203ENST00000367390 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
LHX9-203ENST00000367390 YTHDC1Q96MU7 727 aaKnown RBP14.9□□□□□ -0.02
LHX9-203ENST00000367390 DAXXQ9UER7 740 aaPredicted RBP14.86□□□□□ -0.03
LHX9-203ENST00000367390 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
LHX9-203ENST00000367390 APLP2Q06481 763 aa14.75□□□□□ -0.05
LHX9-203ENST00000367390 NEFLP07196 543 aa14.75□□□□□ -0.05
LHX9-203ENST00000367390 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
LHX9-203ENST00000367390 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
LHX9-203ENST00000367390 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
LHX9-203ENST00000367390 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
LHX9-203ENST00000367390 ZNF316A6NFI3 1004 aaPredicted RBP14.41□□□□□ -0.1
LHX9-203ENST00000367390 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
LHX9-203ENST00000367390 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
LHX9-203ENST00000367390 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
LHX9-203ENST00000367390 CLSPNQ9HAW4 1339 aa14.23□□□□□ -0.13
LHX9-203ENST00000367390 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
LHX9-203ENST00000367390 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
LHX9-203ENST00000367390 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
LHX9-203ENST00000367390 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
LHX9-203ENST00000367390 MYT1LQ9UL68 1186 aa14□□□□□ -0.17
LHX9-203ENST00000367390 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
LHX9-203ENST00000367390 CHIC1Q5VXU3 224 aa13.97□□□□□ -0.17
LHX9-203ENST00000367390 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
LHX9-203ENST00000367390 BCL11AQ9H165 835 aa13.92□□□□□ -0.18
LHX9-203ENST00000367390 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
LHX9-203ENST00000367390 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
LHX9-203ENST00000367390 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
LHX9-203ENST00000367390 ANP32BQ92688 251 aaKnown RBP13.72□□□□□ -0.21
LHX9-203ENST00000367390 CDK11BP21127 795 aaKnown RBP13.72□□□□□ -0.21
LHX9-203ENST00000367390 CDK11AQ9UQ88 783 aaPredicted RBP13.72□□□□□ -0.21
LHX9-203ENST00000367390 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
LHX9-203ENST00000367390 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
LHX9-203ENST00000367390 BCANQ96GW7 911 aa13.52□□□□□ -0.24
LHX9-203ENST00000367390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
LHX9-203ENST00000367390 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
LHX9-203ENST00000367390 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
LHX9-203ENST00000367390 ITGAEP38570 1179 aa13.5□□□□□ -0.25
LHX9-203ENST00000367390 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
LHX9-203ENST00000367390 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
LHX9-203ENST00000367390 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
LHX9-203ENST00000367390 ARXQ96QS3 562 aa13.43□□□□□ -0.26
LHX9-203ENST00000367390 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
LHX9-203ENST00000367390 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
LHX9-203ENST00000367390 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
LHX9-203ENST00000367390 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
LHX9-203ENST00000367390 ANP32AP39687 249 aaKnown RBP13.39□□□□□ -0.27
LHX9-203ENST00000367390 NEFMP07197 916 aa13.31□□□□□ -0.28
LHX9-203ENST00000367390 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
LHX9-203ENST00000367390 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
LHX9-203ENST00000367390 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
LHX9-203ENST00000367390 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
LHX9-203ENST00000367390 HRCP23327 699 aa13.16□□□□□ -0.3
LHX9-203ENST00000367390 NBR1Q14596 966 aa13.16□□□□□ -0.3
LHX9-203ENST00000367390 ABCC9O60706 1549 aa13.15□□□□□ -0.3
LHX9-203ENST00000367390 PRM3Q9NNZ6 103 aa13.14□□□□□ -0.31
LHX9-203ENST00000367390 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
LHX9-203ENST00000367390 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
LHX9-203ENST00000367390 DIEXFQ68CQ4 756 aaKnown RBP13.07□□□□□ -0.32
LHX9-203ENST00000367390 A0A0G2JS52 829 aa13.05□□□□□ -0.32
LHX9-203ENST00000367390 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
LHX9-203ENST00000367390 GTF3C3Q9Y5Q9 886 aa13.04□□□□□ -0.32
LHX9-203ENST00000367390 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
LHX9-203ENST00000367390 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
LHX9-203ENST00000367390 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
LHX9-203ENST00000367390 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
LHX9-203ENST00000367390 ANP32CO43423 234 aa13.03□□□□□ -0.32
LHX9-203ENST00000367390 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
LHX9-203ENST00000367390 CLSTN1O94985 981 aa13.02□□□□□ -0.33
LHX9-203ENST00000367390 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
LHX9-203ENST00000367390 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
LHX9-203ENST00000367390 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
LHX9-203ENST00000367390 NAP1L5Q96NT1 182 aaPredicted RBP12.96□□□□□ -0.33
LHX9-203ENST00000367390 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
LHX9-203ENST00000367390 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
LHX9-203ENST00000367390 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
LHX9-203ENST00000367390 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
LHX9-203ENST00000367390 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
LHX9-203ENST00000367390 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
LHX9-203ENST00000367390 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
LHX9-203ENST00000367390 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
LHX9-203ENST00000367390 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
LHX9-203ENST00000367390 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
LHX9-203ENST00000367390 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
LHX9-203ENST00000367390 GOLGA6L22H0YM25 854 aa12.82□□□□□ -0.36
LHX9-203ENST00000367390 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
LHX9-203ENST00000367390 PDE4CQ08493 712 aa12.79□□□□□ -0.36
LHX9-203ENST00000367390 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
LHX9-203ENST00000367390 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
LHX9-203ENST00000367390 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.36
LHX9-203ENST00000367390 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
LHX9-203ENST00000367390 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
LHX9-203ENST00000367390 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
LHX9-203ENST00000367390 L1TD1Q5T7N2 865 aaKnown RBP12.74□□□□□ -0.37
LHX9-203ENST00000367390 FKBP8Q14318 412 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms