RNA–Protein interactions for RNA: ENST00000409911.5

LRRTM4-205, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LRRTM4, Length 2,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-205ENST00000409911 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
LRRTM4-205ENST00000409911 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
LRRTM4-205ENST00000409911 MYT1Q01538 1121 aa12.2□□□□□ -0.46
LRRTM4-205ENST00000409911 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
LRRTM4-205ENST00000409911 CCDC180Q9P1Z9 1646 aa11.63□□□□□ -0.55
LRRTM4-205ENST00000409911 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
LRRTM4-205ENST00000409911 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
LRRTM4-205ENST00000409911 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
LRRTM4-205ENST00000409911 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
LRRTM4-205ENST00000409911 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
LRRTM4-205ENST00000409911 APLP2Q06481 763 aa11.28□□□□□ -0.6
LRRTM4-205ENST00000409911 DCAF8L2P0C7V8 631 aa11.27□□□□□ -0.61
LRRTM4-205ENST00000409911 BCL11AQ9H165 835 aa11.13□□□□□ -0.63
LRRTM4-205ENST00000409911 HRCP23327 699 aa11.12□□□□□ -0.63
LRRTM4-205ENST00000409911 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
LRRTM4-205ENST00000409911 ABCC9O60706 1549 aa11.05□□□□□ -0.64
LRRTM4-205ENST00000409911 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
LRRTM4-205ENST00000409911 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
LRRTM4-205ENST00000409911 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
LRRTM4-205ENST00000409911 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
LRRTM4-205ENST00000409911 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
LRRTM4-205ENST00000409911 MYO15BQ96JP2 1530 aa10.86□□□□□ -0.67
LRRTM4-205ENST00000409911 NACADO15069 1562 aa10.81□□□□□ -0.68
LRRTM4-205ENST00000409911 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
LRRTM4-205ENST00000409911 CENPBP07199 599 aaPredicted RBP10.73□□□□□ -0.69
LRRTM4-205ENST00000409911 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
LRRTM4-205ENST00000409911 EIF5BO60841 1220 aaKnown RBP10.66□□□□□ -0.7
LRRTM4-205ENST00000409911 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
LRRTM4-205ENST00000409911 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
LRRTM4-205ENST00000409911 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
LRRTM4-205ENST00000409911 MROH2BQ7Z745 1585 aa10.55□□□□□ -0.72
LRRTM4-205ENST00000409911 CHIC1Q5VXU3 224 aa10.55□□□□□ -0.72
LRRTM4-205ENST00000409911 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
LRRTM4-205ENST00000409911 BICRAQ9NZM4 1560 aa10.5□□□□□ -0.73
LRRTM4-205ENST00000409911 ACIN1Q9UKV3 1341 aaKnown RBP10.5□□□□□ -0.73
LRRTM4-205ENST00000409911 WIZO95785 1651 aa10.49□□□□□ -0.73
LRRTM4-205ENST00000409911 ANP32EQ9BTT0 268 aa10.48□□□□□ -0.73
LRRTM4-205ENST00000409911 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
LRRTM4-205ENST00000409911 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
LRRTM4-205ENST00000409911 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
LRRTM4-205ENST00000409911 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
LRRTM4-205ENST00000409911 NEUROD1Q13562 356 aa10.37□□□□□ -0.75
LRRTM4-205ENST00000409911 UBE2Q2Q8WVN8 375 aa10.37□□□□□ -0.75
LRRTM4-205ENST00000409911 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
LRRTM4-205ENST00000409911 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
LRRTM4-205ENST00000409911 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
LRRTM4-205ENST00000409911 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
LRRTM4-205ENST00000409911 PODXL2Q9NZ53 605 aa10.25□□□□□ -0.77
LRRTM4-205ENST00000409911 LOC105371045A0A1W2PR82 267 aa10.25□□□□□ -0.77
LRRTM4-205ENST00000409911 CCDC88BA6NC98 1476 aa10.24□□□□□ -0.77
LRRTM4-205ENST00000409911 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
LRRTM4-205ENST00000409911 EIF4G1Q04637 1599 aaKnown RBP10.23□□□□□ -0.77
LRRTM4-205ENST00000409911 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
LRRTM4-205ENST00000409911 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
LRRTM4-205ENST00000409911 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
LRRTM4-205ENST00000409911 PEG3Q9GZU2 1588 aa10.19□□□□□ -0.78
LRRTM4-205ENST00000409911 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
LRRTM4-205ENST00000409911 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
LRRTM4-205ENST00000409911 ABCC8Q09428 1581 aa10.14□□□□□ -0.79
LRRTM4-205ENST00000409911 BAZ1BQ9UIG0 1483 aaKnown RBP10.11□□□□□ -0.79
LRRTM4-205ENST00000409911 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
LRRTM4-205ENST00000409911 PLPPR3Q6T4P5 718 aa10.04□□□□□ -0.8
LRRTM4-205ENST00000409911 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
LRRTM4-205ENST00000409911 NCAPD3P42695 1498 aa10.02□□□□□ -0.81
LRRTM4-205ENST00000409911 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
LRRTM4-205ENST00000409911 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
LRRTM4-205ENST00000409911 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
LRRTM4-205ENST00000409911 SOGA1O94964 1423 aa9.98□□□□□ -0.81
LRRTM4-205ENST00000409911 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
LRRTM4-205ENST00000409911 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.81
LRRTM4-205ENST00000409911 ERICH6BQ5W0A0 696 aa9.96□□□□□ -0.82
LRRTM4-205ENST00000409911 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
LRRTM4-205ENST00000409911 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
LRRTM4-205ENST00000409911 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
LRRTM4-205ENST00000409911 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
LRRTM4-205ENST00000409911 NEFLP07196 543 aa9.93□□□□□ -0.82
LRRTM4-205ENST00000409911 AEBP2Q6ZN18 517 aaPredicted RBP9.92□□□□□ -0.82
LRRTM4-205ENST00000409911 ARXQ96QS3 562 aa9.92□□□□□ -0.82
LRRTM4-205ENST00000409911 TRIM26Q12899 539 aaPredicted RBP9.89□□□□□ -0.83
LRRTM4-205ENST00000409911 DNAJC5BQ9UF47 199 aa9.89□□□□□ -0.83
LRRTM4-205ENST00000409911 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
LRRTM4-205ENST00000409911 PDE4CQ08493 712 aa9.87□□□□□ -0.83
LRRTM4-205ENST00000409911 CFTRP13569 1480 aa9.87□□□□□ -0.83
LRRTM4-205ENST00000409911 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
LRRTM4-205ENST00000409911 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
LRRTM4-205ENST00000409911 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
LRRTM4-205ENST00000409911 CUX1P39880 1505 aa9.84□□□□□ -0.83
LRRTM4-205ENST00000409911 BIVM-ERCC5R4GMW8 1640 aa9.82□□□□□ -0.84
LRRTM4-205ENST00000409911 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
LRRTM4-205ENST00000409911 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
LRRTM4-205ENST00000409911 NESP48681 1621 aa9.8□□□□□ -0.84
LRRTM4-205ENST00000409911 PRDM2Q13029 1718 aa9.78□□□□□ -0.84
LRRTM4-205ENST00000409911 EEA1Q15075 1411 aa9.77□□□□□ -0.84
LRRTM4-205ENST00000409911 DEKP35659 375 aaKnown RBP9.76□□□□□ -0.85
LRRTM4-205ENST00000409911 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
LRRTM4-205ENST00000409911 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
LRRTM4-205ENST00000409911 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
LRRTM4-205ENST00000409911 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
LRRTM4-205ENST00000409911 UBTFP17480 764 aaKnown RBP9.75□□□□□ -0.85
LRRTM4-205ENST00000409911 RAPGEF2Q9Y4G8 1499 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms