RNA–Protein interactions for RNA: ENST00000514427.1

LINC01217-201, Transcript of long intergenic non-protein coding RNA 1217, humanhuman

TSL 4 BASIC

Gene LINC01217, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01217-201ENST00000514427 NISCHQ9Y2I1 1504 aa14.28□□□□□ -0.12
LINC01217-201ENST00000514427 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
LINC01217-201ENST00000514427 ZCCHC6Q5VYS8 1495 aaKnown RBP11.99□□□□□ -0.49
LINC01217-201ENST00000514427 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
LINC01217-201ENST00000514427 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
LINC01217-201ENST00000514427 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
LINC01217-201ENST00000514427 ABCC9O60706 1549 aa11.71□□□□□ -0.53
LINC01217-201ENST00000514427 NACADO15069 1562 aa11.64□□□□□ -0.55
LINC01217-201ENST00000514427 RB1CC1Q8TDY2 1594 aa11.52□□□□□ -0.57
LINC01217-201ENST00000514427 SHROOM4Q9ULL8 1493 aa11.5□□□□□ -0.57
LINC01217-201ENST00000514427 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
LINC01217-201ENST00000514427 SUPT5HO00267 1087 aaKnown RBP11.11□□□□□ -0.63
LINC01217-201ENST00000514427 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
LINC01217-201ENST00000514427 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
LINC01217-201ENST00000514427 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
LINC01217-201ENST00000514427 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
LINC01217-201ENST00000514427 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01217-201ENST00000514427 CECR2Q9BXF3 1484 aa11.03□□□□□ -0.64
LINC01217-201ENST00000514427 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
LINC01217-201ENST00000514427 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
LINC01217-201ENST00000514427 PEG3Q9GZU2 1588 aa10.87□□□□□ -0.67
LINC01217-201ENST00000514427 WIZO95785 1651 aa10.83□□□□□ -0.68
LINC01217-201ENST00000514427 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
LINC01217-201ENST00000514427 TOP2AP11388 1531 aaKnown RBP10.81□□□□□ -0.68
LINC01217-201ENST00000514427 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
LINC01217-201ENST00000514427 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
LINC01217-201ENST00000514427 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
LINC01217-201ENST00000514427 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
LINC01217-201ENST00000514427 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
LINC01217-201ENST00000514427 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
LINC01217-201ENST00000514427 CHIC1Q5VXU3 224 aa10.69□□□□□ -0.7
LINC01217-201ENST00000514427 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
LINC01217-201ENST00000514427 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
LINC01217-201ENST00000514427 CFTRP13569 1480 aa10.5□□□□□ -0.73
LINC01217-201ENST00000514427 CADPSQ9ULU8 1353 aa10.48□□□□□ -0.73
LINC01217-201ENST00000514427 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
LINC01217-201ENST00000514427 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
LINC01217-201ENST00000514427 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
LINC01217-201ENST00000514427 EEA1Q15075 1411 aa10.35□□□□□ -0.75
LINC01217-201ENST00000514427 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
LINC01217-201ENST00000514427 PDS5BQ9NTI5 1447 aa10.33□□□□□ -0.76
LINC01217-201ENST00000514427 PRDM2Q13029 1718 aa10.32□□□□□ -0.76
LINC01217-201ENST00000514427 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
LINC01217-201ENST00000514427 FANCD2Q9BXW9 1451 aa10.31□□□□□ -0.76
LINC01217-201ENST00000514427 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
LINC01217-201ENST00000514427 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
LINC01217-201ENST00000514427 CUX1P39880 1505 aa10.27□□□□□ -0.77
LINC01217-201ENST00000514427 CEP164Q9UPV0 1460 aa10.26□□□□□ -0.77
LINC01217-201ENST00000514427 NESP48681 1621 aa10.25□□□□□ -0.77
LINC01217-201ENST00000514427 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
LINC01217-201ENST00000514427 SOGA1O94964 1423 aa10.24□□□□□ -0.77
LINC01217-201ENST00000514427 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
LINC01217-201ENST00000514427 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
LINC01217-201ENST00000514427 LOC105371045A0A1W2PR82 267 aa10.2□□□□□ -0.78
LINC01217-201ENST00000514427 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
LINC01217-201ENST00000514427 TOPBP1Q92547 1522 aa10.18□□□□□ -0.78
LINC01217-201ENST00000514427 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
LINC01217-201ENST00000514427 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
LINC01217-201ENST00000514427 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
LINC01217-201ENST00000514427 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
LINC01217-201ENST00000514427 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
LINC01217-201ENST00000514427 ABCA10Q8WWZ4 1543 aa10.13□□□□□ -0.79
LINC01217-201ENST00000514427 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
LINC01217-201ENST00000514427 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
LINC01217-201ENST00000514427 KIF21BO75037 1637 aa10.11□□□□□ -0.79
LINC01217-201ENST00000514427 CUX2O14529 1486 aa10.11□□□□□ -0.79
LINC01217-201ENST00000514427 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
LINC01217-201ENST00000514427 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
LINC01217-201ENST00000514427 IGF1RP08069 1367 aa10.09□□□□□ -0.79
LINC01217-201ENST00000514427 ERCC6Q03468 1493 aa10.09□□□□□ -0.79
LINC01217-201ENST00000514427 WDR62O43379 1518 aa10.08□□□□□ -0.8
LINC01217-201ENST00000514427 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
LINC01217-201ENST00000514427 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
LINC01217-201ENST00000514427 RAD54L2Q9Y4B4 1467 aa10.06□□□□□ -0.8
LINC01217-201ENST00000514427 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
LINC01217-201ENST00000514427 CARMIL1Q5VZK9 1371 aa10.04□□□□□ -0.8
LINC01217-201ENST00000514427 WDR97A6NE52 1622 aa10.03□□□□□ -0.8
LINC01217-201ENST00000514427 RAPGEF2Q9Y4G8 1499 aa10.03□□□□□ -0.8
LINC01217-201ENST00000514427 GAPVD1Q14C86 1478 aa10.02□□□□□ -0.81
LINC01217-201ENST00000514427 TARBP1Q13395 1621 aaKnown RBP10.01□□□□□ -0.81
LINC01217-201ENST00000514427 CEP162Q5TB80 1403 aa10□□□□□ -0.81
LINC01217-201ENST00000514427 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
LINC01217-201ENST00000514427 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
LINC01217-201ENST00000514427 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
LINC01217-201ENST00000514427 ABCA5Q8WWZ7 1642 aa9.99□□□□□ -0.81
LINC01217-201ENST00000514427 CUL7Q14999 1698 aa9.98□□□□□ -0.81
LINC01217-201ENST00000514427 GRIN2BQ13224 1484 aa9.96□□□□□ -0.82
LINC01217-201ENST00000514427 CLIP1P30622 1438 aa9.95□□□□□ -0.82
LINC01217-201ENST00000514427 FHAD1B1AJZ9 1412 aa9.94□□□□□ -0.82
LINC01217-201ENST00000514427 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
LINC01217-201ENST00000514427 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
LINC01217-201ENST00000514427 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
LINC01217-201ENST00000514427 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
LINC01217-201ENST00000514427 ADAMTS12P58397 1594 aa9.86□□□□□ -0.83
LINC01217-201ENST00000514427 PBRM1Q86U86 1689 aa9.86□□□□□ -0.83
LINC01217-201ENST00000514427 EIF4G3O43432 1585 aaKnown RBP9.85□□□□□ -0.83
LINC01217-201ENST00000514427 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
LINC01217-201ENST00000514427 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
LINC01217-201ENST00000514427 SYNJ2O15056 1496 aa9.84□□□□□ -0.83
LINC01217-201ENST00000514427 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms