RNA–Protein interactions for RNA: ENST00000507777.5

COPB2-205, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2 BASIC

Gene COPB2, Length 3,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-205ENST00000507777 NISCHQ9Y2I1 1504 aa9.64□□□□□ -0.87
COPB2-205ENST00000507777 CHIC1Q5VXU3 224 aa9.6□□□□□ -0.87
COPB2-205ENST00000507777 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
COPB2-205ENST00000507777 HRCP23327 699 aa9.53□□□□□ -0.88
COPB2-205ENST00000507777 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
COPB2-205ENST00000507777 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
COPB2-205ENST00000507777 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
COPB2-205ENST00000507777 SCAF1Q9H7N4 1312 aaKnown RBP9.24□□□□□ -0.93
COPB2-205ENST00000507777 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
COPB2-205ENST00000507777 MYT1Q01538 1121 aa9.12□□□□□ -0.95
COPB2-205ENST00000507777 CCDC180Q9P1Z9 1646 aa9.07□□□□□ -0.96
COPB2-205ENST00000507777 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
COPB2-205ENST00000507777 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
COPB2-205ENST00000507777 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
COPB2-205ENST00000507777 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
COPB2-205ENST00000507777 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
COPB2-205ENST00000507777 LOC105371045A0A1W2PR82 267 aa8.86□□□□□ -0.99
COPB2-205ENST00000507777 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
COPB2-205ENST00000507777 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
COPB2-205ENST00000507777 BCL11AQ9H165 835 aa8.74□□□□□ -1.01
COPB2-205ENST00000507777 CENPBP07199 599 aaPredicted RBP8.73□□□□□ -1.01
COPB2-205ENST00000507777 YTHDC1Q96MU7 727 aaKnown RBP8.72□□□□□ -1.01
COPB2-205ENST00000507777 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
COPB2-205ENST00000507777 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
COPB2-205ENST00000507777 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.02
COPB2-205ENST00000507777 DIEXFQ68CQ4 756 aaKnown RBP8.63□□□□□ -1.03
COPB2-205ENST00000507777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
COPB2-205ENST00000507777 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
COPB2-205ENST00000507777 CCER1Q8TC90 406 aaPredicted RBP8.56□□□□□ -1.04
COPB2-205ENST00000507777 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
COPB2-205ENST00000507777 CSRNP3Q8WYN3 585 aa8.51□□□□□ -1.05
COPB2-205ENST00000507777 ANP32EQ9BTT0 268 aa8.51□□□□□ -1.05
COPB2-205ENST00000507777 MIER1Q8N108 512 aa8.41□□□□□ -1.06
COPB2-205ENST00000507777 DCAF8L2P0C7V8 631 aa8.4□□□□□ -1.06
COPB2-205ENST00000507777 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.07
COPB2-205ENST00000507777 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
COPB2-205ENST00000507777 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
COPB2-205ENST00000507777 TRIM41Q8WV44 630 aa8.35□□□□□ -1.07
COPB2-205ENST00000507777 ZNF316A6NFI3 1004 aaPredicted RBP8.34□□□□□ -1.07
COPB2-205ENST00000507777 BCANQ96GW7 911 aa8.34□□□□□ -1.07
COPB2-205ENST00000507777 NACADO15069 1562 aa8.33□□□□□ -1.08
COPB2-205ENST00000507777 RB1CC1Q8TDY2 1594 aa8.25□□□□□ -1.09
COPB2-205ENST00000507777 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
COPB2-205ENST00000507777 ERICH6Q7L0X2 663 aa8.23□□□□□ -1.09
COPB2-205ENST00000507777 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
COPB2-205ENST00000507777 ITGAEP38570 1179 aa8.18□□□□□ -1.1
COPB2-205ENST00000507777 RBM19Q9Y4C8 960 aaKnown RBP8.17□□□□□ -1.1
COPB2-205ENST00000507777 CCDC136Q96JN2 1154 aa8.16□□□□□ -1.1
COPB2-205ENST00000507777 FKBP8Q14318 412 aa8.15□□□□□ -1.1
COPB2-205ENST00000507777 MSH5O43196 834 aa8.13□□□□□ -1.11
COPB2-205ENST00000507777 HNRNPUL2Q1KMD3 747 aaKnown RBP8.13□□□□□ -1.11
COPB2-205ENST00000507777 SENP3Q9H4L4 574 aaPredicted RBP8.11□□□□□ -1.11
COPB2-205ENST00000507777 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
COPB2-205ENST00000507777 ZCCHC6Q5VYS8 1495 aaKnown RBP8.11□□□□□ -1.11
COPB2-205ENST00000507777 APLP2Q06481 763 aa8.1□□□□□ -1.11
COPB2-205ENST00000507777 KCNH8Q96L42 1107 aa8.1□□□□□ -1.11
COPB2-205ENST00000507777 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
COPB2-205ENST00000507777 BICRAQ9NZM4 1560 aa8.09□□□□□ -1.11
COPB2-205ENST00000507777 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
COPB2-205ENST00000507777 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
COPB2-205ENST00000507777 RTN4Q9NQC3 1192 aaKnown RBP8.07□□□□□ -1.12
COPB2-205ENST00000507777 ABCC9O60706 1549 aa8.06□□□□□ -1.12
COPB2-205ENST00000507777 NBR1Q14596 966 aa8.05□□□□□ -1.12
COPB2-205ENST00000507777 NEFLP07196 543 aa8.03□□□□□ -1.12
COPB2-205ENST00000507777 IRX6P78412 446 aaPredicted RBP7.99□□□□□ -1.13
COPB2-205ENST00000507777 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
COPB2-205ENST00000507777 IL27Q8NEV9 243 aa7.97□□□□□ -1.13
COPB2-205ENST00000507777 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
COPB2-205ENST00000507777 PLPPR3Q6T4P5 718 aa7.93□□□□□ -1.14
COPB2-205ENST00000507777 CDK11AQ9UQ88 783 aaPredicted RBP7.92□□□□□ -1.14
COPB2-205ENST00000507777 UBTFP17480 764 aaKnown RBP7.9□□□□□ -1.14
COPB2-205ENST00000507777 FANCIQ9NVI1 1328 aa7.9□□□□□ -1.15
COPB2-205ENST00000507777 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
COPB2-205ENST00000507777 UBE2Q2Q8WVN8 375 aa7.89□□□□□ -1.15
COPB2-205ENST00000507777 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
COPB2-205ENST00000507777 PAK3O75914 559 aaPredicted RBP7.88□□□□□ -1.15
COPB2-205ENST00000507777 MYT1LQ9UL68 1186 aa7.87□□□□□ -1.15
COPB2-205ENST00000507777 CEP162Q5TB80 1403 aa7.86□□□□□ -1.15
COPB2-205ENST00000507777 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
COPB2-205ENST00000507777 HIRIP3Q9BW71 556 aaPredicted RBP7.86□□□□□ -1.15
COPB2-205ENST00000507777 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
COPB2-205ENST00000507777 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
COPB2-205ENST00000507777 RSF1Q96T23 1441 aaPredicted RBP7.82□□□□□ -1.16
COPB2-205ENST00000507777 B4GALNT3Q6L9W6 998 aa7.8□□□□□ -1.16
COPB2-205ENST00000507777 TIMELESSQ9UNS1 1208 aa7.8□□□□□ -1.16
COPB2-205ENST00000507777 PEG3Q9GZU2 1588 aa7.8□□□□□ -1.16
COPB2-205ENST00000507777 WRNQ14191 1432 aaPredicted RBP eCLIP7.8□□□□□ -1.16
COPB2-205ENST00000507777 PKNOX2Q96KN3 472 aa7.79□□□□□ -1.16
COPB2-205ENST00000507777 HNRNPUQ00839 825 aaKnown RBP eCLIP7.77□□□□□ -1.17
COPB2-205ENST00000507777 PLEKHG5O94827 1062 aa7.76□□□□□ -1.17
COPB2-205ENST00000507777 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
COPB2-205ENST00000507777 DHX57Q6P158 1386 aaKnown RBP7.75□□□□□ -1.17
COPB2-205ENST00000507777 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
COPB2-205ENST00000507777 BRPF3Q9ULD4 1205 aa7.75□□□□□ -1.17
COPB2-205ENST00000507777 ANP32CO43423 234 aa7.74□□□□□ -1.17
COPB2-205ENST00000507777 SCRIBQ14160 1630 aa7.73□□□□□ -1.17
COPB2-205ENST00000507777 ZBTB47Q9UFB7 747 aaPredicted RBP7.73□□□□□ -1.17
COPB2-205ENST00000507777 EIF4G1Q04637 1599 aaKnown RBP7.72□□□□□ -1.17
COPB2-205ENST00000507777 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
COPB2-205ENST00000507777 NEFMP07197 916 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms