RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
SHROOM4-202ENST00000376020 MYT1Q01538 1121 aa14.39□□□□□ -0.11
SHROOM4-202ENST00000376020 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
SHROOM4-202ENST00000376020 ZEB1P37275 1124 aaPredicted RBP13.95□□□□□ -0.18
SHROOM4-202ENST00000376020 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-202ENST00000376020 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
SHROOM4-202ENST00000376020 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
SHROOM4-202ENST00000376020 CCER1Q8TC90 406 aaPredicted RBP13.59□□□□□ -0.23
SHROOM4-202ENST00000376020 APLP2Q06481 763 aa13.42□□□□□ -0.26
SHROOM4-202ENST00000376020 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.27
SHROOM4-202ENST00000376020 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-202ENST00000376020 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
SHROOM4-202ENST00000376020 HRCP23327 699 aa13.26□□□□□ -0.29
SHROOM4-202ENST00000376020 TRIM26Q12899 539 aaPredicted RBP13.2□□□□□ -0.3
SHROOM4-202ENST00000376020 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
SHROOM4-202ENST00000376020 NEFLP07196 543 aa13.15□□□□□ -0.3
SHROOM4-202ENST00000376020 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
SHROOM4-202ENST00000376020 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
SHROOM4-202ENST00000376020 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
SHROOM4-202ENST00000376020 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
SHROOM4-202ENST00000376020 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
SHROOM4-202ENST00000376020 DCAF1Q9Y4B6 1507 aa12.79□□□□□ -0.36
SHROOM4-202ENST00000376020 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.37
SHROOM4-202ENST00000376020 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
SHROOM4-202ENST00000376020 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
SHROOM4-202ENST00000376020 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
SHROOM4-202ENST00000376020 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
SHROOM4-202ENST00000376020 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
SHROOM4-202ENST00000376020 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
SHROOM4-202ENST00000376020 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
SHROOM4-202ENST00000376020 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
SHROOM4-202ENST00000376020 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
SHROOM4-202ENST00000376020 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
SHROOM4-202ENST00000376020 CDK11AQ9UQ88 783 aaPredicted RBP12.36□□□□□ -0.43
SHROOM4-202ENST00000376020 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
SHROOM4-202ENST00000376020 EEA1Q15075 1411 aa12.28□□□□□ -0.44
SHROOM4-202ENST00000376020 ANP32CO43423 234 aa12.27□□□□□ -0.45
SHROOM4-202ENST00000376020 ANP32AP39687 249 aaKnown RBP12.25□□□□□ -0.45
SHROOM4-202ENST00000376020 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
SHROOM4-202ENST00000376020 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
SHROOM4-202ENST00000376020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
SHROOM4-202ENST00000376020 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
SHROOM4-202ENST00000376020 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
SHROOM4-202ENST00000376020 ANP32EQ9BTT0 268 aa12.09□□□□□ -0.47
SHROOM4-202ENST00000376020 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
SHROOM4-202ENST00000376020 RANGAP1P46060 587 aaPredicted RBP12.04□□□□□ -0.48
SHROOM4-202ENST00000376020 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
SHROOM4-202ENST00000376020 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
SHROOM4-202ENST00000376020 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
SHROOM4-202ENST00000376020 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
SHROOM4-202ENST00000376020 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
SHROOM4-202ENST00000376020 ERICH6BQ5W0A0 696 aa11.95□□□□□ -0.5
SHROOM4-202ENST00000376020 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
SHROOM4-202ENST00000376020 NACADO15069 1562 aa11.94□□□□□ -0.5
SHROOM4-202ENST00000376020 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
SHROOM4-202ENST00000376020 ITGAEP38570 1179 aa11.92□□□□□ -0.5
SHROOM4-202ENST00000376020 TIMELESSQ9UNS1 1208 aa11.92□□□□□ -0.5
SHROOM4-202ENST00000376020 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
SHROOM4-202ENST00000376020 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
SHROOM4-202ENST00000376020 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
SHROOM4-202ENST00000376020 ABCC9O60706 1549 aa11.9□□□□□ -0.5
SHROOM4-202ENST00000376020 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.51
SHROOM4-202ENST00000376020 FAM50AQ14320 339 aaKnown RBP11.88□□□□□ -0.51
SHROOM4-202ENST00000376020 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
SHROOM4-202ENST00000376020 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
SHROOM4-202ENST00000376020 CLIP1P30622 1438 aa11.86□□□□□ -0.51
SHROOM4-202ENST00000376020 NEFMP07197 916 aa11.86□□□□□ -0.51
SHROOM4-202ENST00000376020 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
SHROOM4-202ENST00000376020 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
SHROOM4-202ENST00000376020 FKBP8Q14318 412 aa11.83□□□□□ -0.52
SHROOM4-202ENST00000376020 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
SHROOM4-202ENST00000376020 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
SHROOM4-202ENST00000376020 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
SHROOM4-202ENST00000376020 BECN1Q14457 450 aa11.8□□□□□ -0.52
SHROOM4-202ENST00000376020 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
SHROOM4-202ENST00000376020 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
SHROOM4-202ENST00000376020 CCDC136Q96JN2 1154 aa11.78□□□□□ -0.52
SHROOM4-202ENST00000376020 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
SHROOM4-202ENST00000376020 BCANQ96GW7 911 aa11.77□□□□□ -0.52
SHROOM4-202ENST00000376020 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.52
SHROOM4-202ENST00000376020 HNRNPUQ00839 825 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHROOM4-202ENST00000376020 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
SHROOM4-202ENST00000376020 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
SHROOM4-202ENST00000376020 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
SHROOM4-202ENST00000376020 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
SHROOM4-202ENST00000376020 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
SHROOM4-202ENST00000376020 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
SHROOM4-202ENST00000376020 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
SHROOM4-202ENST00000376020 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
SHROOM4-202ENST00000376020 GOLGA6L22H0YM25 854 aa11.68□□□□□ -0.54
SHROOM4-202ENST00000376020 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
SHROOM4-202ENST00000376020 MIER1Q8N108 512 aa11.66□□□□□ -0.54
SHROOM4-202ENST00000376020 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
SHROOM4-202ENST00000376020 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHROOM4-202ENST00000376020 USP35Q9P2H5 1018 aa11.65□□□□□ -0.54
SHROOM4-202ENST00000376020 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
SHROOM4-202ENST00000376020 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
SHROOM4-202ENST00000376020 PTMSP20962 102 aa11.63□□□□□ -0.55
SHROOM4-202ENST00000376020 CHMP4BQ9H444 224 aaKnown RBP11.63□□□□□ -0.55
SHROOM4-202ENST00000376020 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms