RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
CDKL5-209ENST00000635828 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
CDKL5-209ENST00000635828 ABCC9O60706 1549 aa17.51■□□□□ 0.39
CDKL5-209ENST00000635828 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
CDKL5-209ENST00000635828 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
CDKL5-209ENST00000635828 NACADO15069 1562 aa16.73■□□□□ 0.27
CDKL5-209ENST00000635828 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
CDKL5-209ENST00000635828 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
CDKL5-209ENST00000635828 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
CDKL5-209ENST00000635828 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
CDKL5-209ENST00000635828 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
CDKL5-209ENST00000635828 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
CDKL5-209ENST00000635828 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDKL5-209ENST00000635828 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
CDKL5-209ENST00000635828 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
CDKL5-209ENST00000635828 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
CDKL5-209ENST00000635828 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
CDKL5-209ENST00000635828 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
CDKL5-209ENST00000635828 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
CDKL5-209ENST00000635828 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
CDKL5-209ENST00000635828 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
CDKL5-209ENST00000635828 WIZO95785 1651 aa15.66■□□□□ 0.1
CDKL5-209ENST00000635828 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
CDKL5-209ENST00000635828 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
CDKL5-209ENST00000635828 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
CDKL5-209ENST00000635828 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
CDKL5-209ENST00000635828 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
CDKL5-209ENST00000635828 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
CDKL5-209ENST00000635828 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
CDKL5-209ENST00000635828 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
CDKL5-209ENST00000635828 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
CDKL5-209ENST00000635828 NESP48681 1621 aa15.27■□□□□ 0.04
CDKL5-209ENST00000635828 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
CDKL5-209ENST00000635828 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
CDKL5-209ENST00000635828 CFTRP13569 1480 aa15.04■□□□□ -0
CDKL5-209ENST00000635828 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
CDKL5-209ENST00000635828 LAMC3Q9Y6N6 1575 aa15.02■□□□□ -0
CDKL5-209ENST00000635828 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
CDKL5-209ENST00000635828 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
CDKL5-209ENST00000635828 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
CDKL5-209ENST00000635828 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
CDKL5-209ENST00000635828 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
CDKL5-209ENST00000635828 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
CDKL5-209ENST00000635828 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
CDKL5-209ENST00000635828 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
CDKL5-209ENST00000635828 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
CDKL5-209ENST00000635828 CUX1P39880 1505 aa14.76□□□□□ -0.05
CDKL5-209ENST00000635828 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
CDKL5-209ENST00000635828 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
CDKL5-209ENST00000635828 WDR62O43379 1518 aa14.73□□□□□ -0.05
CDKL5-209ENST00000635828 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
CDKL5-209ENST00000635828 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
CDKL5-209ENST00000635828 CUX2O14529 1486 aa14.67□□□□□ -0.06
CDKL5-209ENST00000635828 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
CDKL5-209ENST00000635828 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
CDKL5-209ENST00000635828 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
CDKL5-209ENST00000635828 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
CDKL5-209ENST00000635828 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
CDKL5-209ENST00000635828 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
CDKL5-209ENST00000635828 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
CDKL5-209ENST00000635828 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
CDKL5-209ENST00000635828 SOGA1O94964 1423 aa14.57□□□□□ -0.08
CDKL5-209ENST00000635828 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
CDKL5-209ENST00000635828 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
CDKL5-209ENST00000635828 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDKL5-209ENST00000635828 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
CDKL5-209ENST00000635828 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
CDKL5-209ENST00000635828 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
CDKL5-209ENST00000635828 EIF4G3O43432 1585 aaKnown RBP14.49□□□□□ -0.09
CDKL5-209ENST00000635828 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
CDKL5-209ENST00000635828 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
CDKL5-209ENST00000635828 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
CDKL5-209ENST00000635828 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
CDKL5-209ENST00000635828 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
CDKL5-209ENST00000635828 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
CDKL5-209ENST00000635828 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
CDKL5-209ENST00000635828 FBLN2P98095 1184 aa14.35□□□□□ -0.11
CDKL5-209ENST00000635828 IGF1RP08069 1367 aa14.32□□□□□ -0.12
CDKL5-209ENST00000635828 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
CDKL5-209ENST00000635828 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
CDKL5-209ENST00000635828 CHD1O14646 1710 aa14.29□□□□□ -0.12
CDKL5-209ENST00000635828 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
CDKL5-209ENST00000635828 ERICH3Q5RHP9 1530 aa14.24□□□□□ -0.13
CDKL5-209ENST00000635828 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
CDKL5-209ENST00000635828 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
CDKL5-209ENST00000635828 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.14
CDKL5-209ENST00000635828 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.14
CDKL5-209ENST00000635828 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
CDKL5-209ENST00000635828 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
CDKL5-209ENST00000635828 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
CDKL5-209ENST00000635828 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
CDKL5-209ENST00000635828 CEP170Q5SW79 1584 aa14.16□□□□□ -0.14
CDKL5-209ENST00000635828 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
CDKL5-209ENST00000635828 CUL7Q14999 1698 aa14.15□□□□□ -0.14
CDKL5-209ENST00000635828 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
CDKL5-209ENST00000635828 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
CDKL5-209ENST00000635828 RANGAP1P46060 587 aaPredicted RBP14.13□□□□□ -0.15
CDKL5-209ENST00000635828 EEA1Q15075 1411 aa14.08□□□□□ -0.16
CDKL5-209ENST00000635828 NUP160Q12769 1436 aa14.07□□□□□ -0.16
CDKL5-209ENST00000635828 ERCC6L2Q5T890 1561 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms