RNA–Protein interactions for RNA: ENST00000389398.9

VWA3A-202, Transcript of von Willebrand factor A domain containing 3A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VWA3A, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-202ENST00000389398 MYT1Q01538 1121 aa13.57□□□□□ -0.24
VWA3A-202ENST00000389398 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
VWA3A-202ENST00000389398 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.26
VWA3A-202ENST00000389398 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
VWA3A-202ENST00000389398 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
VWA3A-202ENST00000389398 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
VWA3A-202ENST00000389398 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
VWA3A-202ENST00000389398 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
VWA3A-202ENST00000389398 ABCC9O60706 1549 aa12.33□□□□□ -0.44
VWA3A-202ENST00000389398 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
VWA3A-202ENST00000389398 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
VWA3A-202ENST00000389398 YTHDC1Q96MU7 727 aaKnown RBP12.23□□□□□ -0.45
VWA3A-202ENST00000389398 NEFLP07196 543 aa12.15□□□□□ -0.46
VWA3A-202ENST00000389398 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
VWA3A-202ENST00000389398 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
VWA3A-202ENST00000389398 HRCP23327 699 aa11.97□□□□□ -0.49
VWA3A-202ENST00000389398 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
VWA3A-202ENST00000389398 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
VWA3A-202ENST00000389398 GLIPR1L2Q4G1C9 344 aa11.79□□□□□ -0.52
VWA3A-202ENST00000389398 APLP2Q06481 763 aa11.78□□□□□ -0.52
VWA3A-202ENST00000389398 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
VWA3A-202ENST00000389398 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
VWA3A-202ENST00000389398 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
VWA3A-202ENST00000389398 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
VWA3A-202ENST00000389398 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
VWA3A-202ENST00000389398 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
VWA3A-202ENST00000389398 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
VWA3A-202ENST00000389398 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
VWA3A-202ENST00000389398 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
VWA3A-202ENST00000389398 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
VWA3A-202ENST00000389398 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
VWA3A-202ENST00000389398 ACIN1Q9UKV3 1341 aaKnown RBP11.48□□□□□ -0.57
VWA3A-202ENST00000389398 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
VWA3A-202ENST00000389398 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
VWA3A-202ENST00000389398 SHROOM4Q9ULL8 1493 aa11.4□□□□□ -0.58
VWA3A-202ENST00000389398 FBLN2P98095 1184 aa11.4□□□□□ -0.58
VWA3A-202ENST00000389398 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
VWA3A-202ENST00000389398 BCANQ96GW7 911 aa11.33□□□□□ -0.6
VWA3A-202ENST00000389398 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
VWA3A-202ENST00000389398 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
VWA3A-202ENST00000389398 ANP32AP39687 249 aaKnown RBP11.28□□□□□ -0.6
VWA3A-202ENST00000389398 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
VWA3A-202ENST00000389398 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
VWA3A-202ENST00000389398 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
VWA3A-202ENST00000389398 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
VWA3A-202ENST00000389398 TNNT2P45379 298 aaPredicted RBP11.17□□□□□ -0.62
VWA3A-202ENST00000389398 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
VWA3A-202ENST00000389398 NBR1Q14596 966 aa11.1□□□□□ -0.63
VWA3A-202ENST00000389398 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
VWA3A-202ENST00000389398 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
VWA3A-202ENST00000389398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.06□□□□□ -0.64
VWA3A-202ENST00000389398 CDK11BP21127 795 aaKnown RBP11.04□□□□□ -0.64
VWA3A-202ENST00000389398 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
VWA3A-202ENST00000389398 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
VWA3A-202ENST00000389398 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
VWA3A-202ENST00000389398 PLPPR3Q6T4P5 718 aa11.02□□□□□ -0.65
VWA3A-202ENST00000389398 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
VWA3A-202ENST00000389398 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
VWA3A-202ENST00000389398 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
VWA3A-202ENST00000389398 FKBP8Q14318 412 aa11□□□□□ -0.65
VWA3A-202ENST00000389398 POLR3GLQ9BT43 218 aa10.98□□□□□ -0.65
VWA3A-202ENST00000389398 TRIM44Q96DX7 344 aaPredicted RBP10.97□□□□□ -0.65
VWA3A-202ENST00000389398 HNRNPUL2Q1KMD3 747 aaKnown RBP10.97□□□□□ -0.65
VWA3A-202ENST00000389398 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
VWA3A-202ENST00000389398 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
VWA3A-202ENST00000389398 ANP32CO43423 234 aa10.96□□□□□ -0.65
VWA3A-202ENST00000389398 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
VWA3A-202ENST00000389398 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
VWA3A-202ENST00000389398 NEFMP07197 916 aa10.91□□□□□ -0.66
VWA3A-202ENST00000389398 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
VWA3A-202ENST00000389398 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
VWA3A-202ENST00000389398 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
VWA3A-202ENST00000389398 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
VWA3A-202ENST00000389398 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
VWA3A-202ENST00000389398 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
VWA3A-202ENST00000389398 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
VWA3A-202ENST00000389398 DEKP35659 375 aaKnown RBP10.83□□□□□ -0.68
VWA3A-202ENST00000389398 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
VWA3A-202ENST00000389398 ARXQ96QS3 562 aa10.83□□□□□ -0.68
VWA3A-202ENST00000389398 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
VWA3A-202ENST00000389398 UPF2Q9HAU5 1272 aaKnown RBP10.82□□□□□ -0.68
VWA3A-202ENST00000389398 HSP90AA1P07900 732 aaKnown RBP10.81□□□□□ -0.68
VWA3A-202ENST00000389398 ITGAEP38570 1179 aa10.81□□□□□ -0.68
VWA3A-202ENST00000389398 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
VWA3A-202ENST00000389398 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
VWA3A-202ENST00000389398 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
VWA3A-202ENST00000389398 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
VWA3A-202ENST00000389398 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
VWA3A-202ENST00000389398 CCDC136Q96JN2 1154 aa10.75□□□□□ -0.69
VWA3A-202ENST00000389398 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
VWA3A-202ENST00000389398 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
VWA3A-202ENST00000389398 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
VWA3A-202ENST00000389398 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
VWA3A-202ENST00000389398 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
VWA3A-202ENST00000389398 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
VWA3A-202ENST00000389398 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
VWA3A-202ENST00000389398 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
VWA3A-202ENST00000389398 HNRNPUQ00839 825 aaKnown RBP eCLIP10.67□□□□□ -0.7
VWA3A-202ENST00000389398 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
VWA3A-202ENST00000389398 PKNOX2Q96KN3 472 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms