Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC10.33□□□□□ -0.76
LCA10Q71F78 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LCA10Q71F78 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.33□□□□□ -0.76
LCA10Q71F78 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LCA10Q71F78 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LCA10Q71F78 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
LCA10Q71F78 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ASL-203ENST00000380839 1765 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SNX3-202ENST00000349379 890 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC10.32□□□□□ -0.76
LCA10Q71F78 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC10.32□□□□□ -0.76
LCA10Q71F78 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 SMUG1P1-201ENST00000590640 811 ntBASIC10.32□□□□□ -0.76
LCA10Q71F78 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 AL365209.1-201ENST00000624418 6473 ntBASIC10.32□□□□□ -0.76
LCA10Q71F78 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 AC093484.2-201ENST00000580996 2166 ntBASIC10.32□□□□□ -0.76
LCA10Q71F78 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LCA10Q71F78 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LCA10Q71F78 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LCA10Q71F78 PXK-203ENST00000383715 1756 ntTSL 5 BASIC10.31□□□□□ -0.76
LCA10Q71F78 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.31□□□□□ -0.76
LCA10Q71F78 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LCA10Q71F78 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.31□□□□□ -0.76
LCA10Q71F78 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.31□□□□□ -0.76
LCA10Q71F78 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC10.31□□□□□ -0.76
LCA10Q71F78 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC10.31□□□□□ -0.76
LCA10Q71F78 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LCA10Q71F78 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.31□□□□□ -0.76
LCA10Q71F78 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.31□□□□□ -0.76
LCA10Q71F78 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms