Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00575Q6W349 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00575Q6W349 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 AL035685.1-201ENST00000636663 812 ntBASIC12.14□□□□□ -0.47
LINC00575Q6W349 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 ANO7L1-203ENST00000602586 1720 ntBASIC12.14□□□□□ -0.47
LINC00575Q6W349 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC00575Q6W349 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00575Q6W349 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 AL162741.1-201ENST00000565563 1558 ntBASIC12.13□□□□□ -0.47
LINC00575Q6W349 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00575Q6W349 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00575Q6W349 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00575Q6W349 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms