Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.1□□□□□ -0.15
CKS2P33552 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 HLA-G-202ENST00000376815 851 ntBASIC14.1□□□□□ -0.15
CKS2P33552 HLA-G-203ENST00000376818 1127 ntBASIC14.1□□□□□ -0.15
CKS2P33552 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CKS2P33552 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.1□□□□□ -0.15
CKS2P33552 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.1□□□□□ -0.15
CKS2P33552 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.1□□□□□ -0.15
CKS2P33552 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CKS2P33552 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS2P33552 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CKS2P33552 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS2P33552 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 FP475955.4-201ENST00000623131 1990 ntBASIC14.09□□□□□ -0.15
CKS2P33552 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CKS2P33552 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.09□□□□□ -0.15
CKS2P33552 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.09□□□□□ -0.15
CKS2P33552 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 AC104187.1-201ENST00000607510 612 ntBASIC14.09□□□□□ -0.15
CKS2P33552 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CKS2P33552 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.09□□□□□ -0.15
CKS2P33552 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
CKS2P33552 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CKS2P33552 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS2P33552 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CKS2P33552 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.08□□□□□ -0.15
CKS2P33552 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CKS2P33552 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CKS2P33552 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
CKS2P33552 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.08□□□□□ -0.16
CKS2P33552 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.08□□□□□ -0.16
CKS2P33552 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms