Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 AP000974.1-201ENST00000623909 2387 ntBASIC13.98□□□□□ -0.17
NACAE9PAV3 AC093503.3-201ENST00000624917 2352 ntBASIC13.98□□□□□ -0.17
NACAE9PAV3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
NACAE9PAV3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.98□□□□□ -0.17
NACAE9PAV3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.98□□□□□ -0.17
NACAE9PAV3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.98□□□□□ -0.17
NACAE9PAV3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.98□□□□□ -0.17
NACAE9PAV3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 SOX15-203ENST00000570788 1093 ntBASIC13.98□□□□□ -0.17
NACAE9PAV3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.98□□□□□ -0.17
NACAE9PAV3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NACAE9PAV3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NACAE9PAV3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.98□□□□□ -0.17
NACAE9PAV3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.97□□□□□ -0.17
NACAE9PAV3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NACAE9PAV3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.97□□□□□ -0.17
NACAE9PAV3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.97□□□□□ -0.17
NACAE9PAV3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.97□□□□□ -0.17
NACAE9PAV3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.97□□□□□ -0.17
NACAE9PAV3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC018445.3-201ENST00000624177 1945 ntBASIC13.97□□□□□ -0.17
NACAE9PAV3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC008550.1-201ENST00000511500 884 ntBASIC13.97□□□□□ -0.17
NACAE9PAV3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.97□□□□□ -0.17
NACAE9PAV3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 HLA-B-256ENST00000639848 1089 ntBASIC13.97□□□□□ -0.17
NACAE9PAV3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NACAE9PAV3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.97□□□□□ -0.17
NACAE9PAV3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NACAE9PAV3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NACAE9PAV3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NACAE9PAV3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 AC012618.2-201ENST00000428058 849 ntBASIC13.96□□□□□ -0.17
NACAE9PAV3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NACAE9PAV3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.96□□□□□ -0.17
NACAE9PAV3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NACAE9PAV3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NACAE9PAV3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NACAE9PAV3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NACAE9PAV3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NACAE9PAV3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms