Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 CROCCP3-202ENST00000420820 1947 ntBASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF103-CHMP3A0A140T963 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 SLC29A4P1-201ENST00000398760 971 ntBASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC073210.2-201ENST00000430369 194 ntBASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC005829.2-201ENST00000571422 1056 ntBASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 LTB4R2-202ENST00000528054 3092 ntBASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF103-CHMP3A0A140T963 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms