Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC004980.1-204ENST00000429707 299 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 AL160286.2-201ENST00000567150 934 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 AL031985.4-201ENST00000642138 673 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 AC104417.2-201ENST00000562989 1793 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 AC010947.1-201ENST00000623454 693 ntBASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB9Q9Y5E1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB9Q9Y5E1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC104076.2-201ENST00000448912 469 ntBASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC116562.2-201ENST00000507042 360 ntBASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms