Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 ABALON-201ENST00000629058 1903 ntBASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 KRT18P20-201ENST00000548986 1279 ntBASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COMMD3Q9UBI1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 IRS3P-201ENST00000223076 1006 ntBASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
COMMD3Q9UBI1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 CYP21A1P-202ENST00000354927 1481 ntBASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COMMD3Q9UBI1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 IRX1P1-201ENST00000438849 1838 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms