Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF183Q96D59 AC131212.4-201ENST00000623606 975 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF183Q96D59 AC133561.5-201ENST00000635547 218 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF183Q96D59 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF183Q96D59 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF183Q96D59 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 AC018445.3-201ENST00000624177 1945 ntBASIC14.19□□□□□ -0.14
RNF183Q96D59 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF183Q96D59 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF183Q96D59 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF183Q96D59 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RNF183Q96D59 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF183Q96D59 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
RNF183Q96D59 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF183Q96D59 FSCN1P1-201ENST00000568912 1481 ntBASIC14.18□□□□□ -0.14
RNF183Q96D59 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF183Q96D59 AC005082.1-201ENST00000413042 2259 ntBASIC14.18□□□□□ -0.14
RNF183Q96D59 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF183Q96D59 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF183Q96D59 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF183Q96D59 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF183Q96D59 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RNF183Q96D59 AL512408.1-201ENST00000569378 2000 ntBASIC14.18□□□□□ -0.14
RNF183Q96D59 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
RNF183Q96D59 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF183Q96D59 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF183Q96D59 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF183Q96D59 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 KRT8P8-201ENST00000434750 1448 ntBASIC14.17□□□□□ -0.14
RNF183Q96D59 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 NOC2LP1-202ENST00000452600 2235 ntBASIC14.17□□□□□ -0.14
RNF183Q96D59 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF183Q96D59 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF183Q96D59 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF183Q96D59 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF183Q96D59 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms