Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AC125437.2-201ENST00000625180 2167 ntBASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AC113347.1-201ENST00000413321 391 ntBASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SCN4BQ8IWT1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 CKBP1-201ENST00000565489 1086 ntBASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 AC116562.4-202ENST00000641738 218 ntBASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 KRT8P11-201ENST00000409686 1436 ntBASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN4BQ8IWT1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TERF1P1-201ENST00000311003 1181 ntBASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 CCR12P-201ENST00000446203 998 ntBASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TREX1-205ENST00000625293 1783 ntBASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN4BQ8IWT1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 LIN28AP1-201ENST00000429574 405 ntBASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 AC092865.7-201ENST00000641832 219 ntBASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN4BQ8IWT1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 SLC25A1P2-201ENST00000430693 912 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms