Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC35B1-206ENST00000504260 2424 ntTSL 213.51□□□□□ -0.251e-6■■□□□ 13
SND1Q7KZF4 SLC35B1-205ENST00000503334 943 ntTSL 313.46□□□□□ -0.251e-6■■□□□ 13
SND1Q7KZF4 SLC35B1-217ENST00000513508 631 ntTSL 211.26□□□□□ -0.611e-6■■□□□ 13
SND1Q7KZF4 SLC35B1-210ENST00000508520 845 ntTSL 510.8□□□□□ -0.681e-6■■□□□ 13
SND1Q7KZF4 SLC35B1-218ENST00000514907 633 ntTSL 59.64□□□□□ -0.871e-6■■□□□ 13
SND1Q7KZF4 SLC35B1-203ENST00000502268 481 ntTSL 38.2□□□□□ -1.11e-6■■□□□ 13
SND1Q7KZF4 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC9.22□□□□□ -0.934e-9■■□□□ 13
SND1Q7KZF4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC9.05□□□□□ -0.964e-9■■□□□ 13
SND1Q7KZF4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.33□□□□□ -1.244e-9■■□□□ 13
SND1Q7KZF4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.23□□□□□ -1.254e-9■■□□□ 13
SND1Q7KZF4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.264e-9■■□□□ 13
SND1Q7KZF4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.364e-9■■□□□ 13
SND1Q7KZF4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.137e-10■■□□□ 13
SND1Q7KZF4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.47□□□□□ -0.097e-10■■□□□ 13
SND1Q7KZF4 EZR-204ENST00000476189 956 ntTSL 312.17□□□□□ -0.467e-7■■□□□ 13
SND1Q7KZF4 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.734e-86■■□□□ 13
SND1Q7KZF4 G3BP1-211ENST00000522666 783 ntTSL 312.06□□□□□ -0.481e-10■■□□□ 13
SND1Q7KZF4 ALG8-215ENST00000530910 860 ntTSL 511.17□□□□□ -0.622e-11■■□□□ 13
SND1Q7KZF4 CAPRIN1-215ENST00000533657 2774 ntTSL 210.65□□□□□ -0.72e-9■■□□□ 13
SND1Q7KZF4 ALG8-205ENST00000525761 468 ntTSL 37.43□□□□□ -1.222e-11■■□□□ 13
SND1Q7KZF4 SLC25A3-208ENST00000547908 893 ntTSL 210.15□□□□□ -0.782e-6■■□□□ 13
SND1Q7KZF4 SSR1-208ENST00000483409 570 ntTSL 413.88□□□□□ -0.195e-8■■□□□ 13
SND1Q7KZF4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.573e-9■■□□□ 13
SND1Q7KZF4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.15■□□□□ 0.53e-9■■□□□ 13
SND1Q7KZF4 ITIH3-209ENST00000493136 2179 ntTSL 214.67□□□□□ -0.064e-11■■□□□ 13
SND1Q7KZF4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.437e-10■■□□□ 13
SND1Q7KZF4 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.57□□□□□ -0.087e-10■■□□□ 13
SND1Q7KZF4 DDX5-218ENST00000581693 2156 ntTSL 512.43□□□□□ -0.427e-10■■□□□ 13
SND1Q7KZF4 DDX5-203ENST00000540698 2225 ntTSL 512.27□□□□□ -0.447e-10■■□□□ 13
SND1Q7KZF4 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC12.22□□□□□ -0.457e-10■■□□□ 13
SND1Q7KZF4 DDX5-215ENST00000581230 3558 ntTSL 29.22□□□□□ -0.937e-10■■□□□ 13
SND1Q7KZF4 ALDH18A1-204ENST00000485428 726 ntTSL 29.27□□□□□ -0.933e-7■■□□□ 12.9
SND1Q7KZF4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.61■■□□□ 1.856e-12■■□□□ 12.9
SND1Q7KZF4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.5■■□□□ 1.836e-12■■□□□ 12.9
SND1Q7KZF4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.29■■□□□ 1.486e-12■■□□□ 12.9
SND1Q7KZF4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.066e-12■■□□□ 12.9
SND1Q7KZF4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.486e-12■■□□□ 12.9
SND1Q7KZF4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.146e-12■■□□□ 12.9
SND1Q7KZF4 PKM-222ENST00000568883 1863 ntTSL 5 BASIC13.9□□□□□ -0.186e-12■■□□□ 12.9
SND1Q7KZF4 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.246e-12■■□□□ 12.9
SND1Q7KZF4 PKM-219ENST00000567118 2254 ntTSL 212.16□□□□□ -0.466e-12■■□□□ 12.9
SND1Q7KZF4 WDR13-206ENST00000479279 2486 ntTSL 1 (best)20.48■□□□□ 0.872e-7■■□□□ 12.9
SND1Q7KZF4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.652e-7■■□□□ 12.9
SND1Q7KZF4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.592e-7■■□□□ 12.9
SND1Q7KZF4 IGF2R-205ENST00000487607 359 ntTSL 28.8□□□□□ -14e-16■■□□□ 12.9
SND1Q7KZF4 SDC1-206ENST00000482879 558 ntTSL 412.75□□□□□ -0.375e-8■■□□□ 12.9
SND1Q7KZF4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.75□□□□□ -1.173e-6■■□□□ 12.9
SND1Q7KZF4 KDELR2-202ENST00000382267 583 ntTSL 410.4□□□□□ -0.744e-11■■□□□ 12.9
SND1Q7KZF4 SLC23A2-205ENST00000496331 761 ntTSL 317.89■□□□□ 0.451e-14■■□□□ 12.9
SND1Q7KZF4 SGSH-211ENST00000574505 587 ntTSL 513.46□□□□□ -0.252e-8■■□□□ 12.9
SND1Q7KZF4 SGSH-208ENST00000572208 584 ntTSL 418.85■□□□□ 0.612e-8■■□□□ 12.9
SND1Q7KZF4 FKBP10-204ENST00000464180 1129 ntTSL 221.69■■□□□ 1.067e-12■■□□□ 12.9
SND1Q7KZF4 FKBP10-207ENST00000490938 837 ntTSL 216.24■□□□□ 0.197e-12■■□□□ 12.9
SND1Q7KZF4 SCARB1-206ENST00000539320 720 ntTSL 222.86■■□□□ 1.253e-10■■□□□ 12.9
SND1Q7KZF4 SCARB1-210ENST00000545493 581 ntTSL 221.7■■□□□ 1.063e-10■■□□□ 12.9
SND1Q7KZF4 ELOVL5-204ENST00000465983 696 ntTSL 313.15□□□□□ -0.34e-12■■□□□ 12.9
SND1Q7KZF4 ELOVL5-206ENST00000486973 794 ntTSL 313□□□□□ -0.334e-12■■□□□ 12.9
SND1Q7KZF4 CP-207ENST00000473296 496 ntTSL 35.44□□□□□ -1.541e-10■■□□□ 12.9
SND1Q7KZF4 FDPS-205ENST00000465559 677 ntTSL 316.06■□□□□ 0.162e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-208ENST00000470171 746 ntTSL 216.04■□□□□ 0.162e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-210ENST00000474345 713 ntTSL 315.73■□□□□ 0.112e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-213ENST00000489003 976 ntTSL 215.73■□□□□ 0.112e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-216ENST00000491013 912 ntTSL 515.18■□□□□ 0.022e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-219ENST00000495308 808 ntTSL 214.09□□□□□ -0.152e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-207ENST00000468479 938 ntTSL 213.93□□□□□ -0.182e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-204ENST00000461507 1022 ntTSL 213.17□□□□□ -0.32e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-211ENST00000477057 741 ntTSL 213.17□□□□□ -0.32e-8■■□□□ 12.9
SND1Q7KZF4 FDPS-209ENST00000471117 630 ntTSL 38.66□□□□□ -1.022e-8■■□□□ 12.9
SND1Q7KZF4 TMEM205-213ENST00000590788 393 ntTSL 312.86□□□□□ -0.351e-6■■□□□ 12.9
SND1Q7KZF4 APP-211ENST00000462267 667 ntTSL 215.89■□□□□ 0.136e-9■■□□□ 12.9
SND1Q7KZF4 C5-202ENST00000460578 521 ntTSL 58.56□□□□□ -1.041e-10■■□□□ 12.9
SND1Q7KZF4 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.821e-6■■□□□ 12.9
SND1Q7KZF4 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.931e-6■■□□□ 12.9
SND1Q7KZF4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.034e-7■■□□□ 12.9
SND1Q7KZF4 GTSF1-204ENST00000546931 902 ntTSL 58.77□□□□□ -1.014e-7■■□□□ 12.9
SND1Q7KZF4 GTSF1-208ENST00000552395 671 ntTSL 58.02□□□□□ -1.134e-7■■□□□ 12.9
SND1Q7KZF4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.374e-7■■□□□ 12.9
SND1Q7KZF4 FST-204ENST00000497789 712 ntTSL 29.14□□□□□ -0.952e-11■■□□□ 12.9
SND1Q7KZF4 SUN2-216ENST00000477262 914 ntTSL 315.92■□□□□ 0.146e-7■■□□□ 12.9
SND1Q7KZF4 CKAP4-202ENST00000552828 831 ntTSL 312.23□□□□□ -0.458e-18■■□□□ 12.9
SND1Q7KZF4 CERS2-204ENST00000368949 1002 ntTSL 514.63□□□□□ -0.071e-7■■□□□ 12.9
SND1Q7KZF4 ALG3-203ENST00000414845 814 ntTSL 517.34■□□□□ 0.371e-6■■□□□ 12.9
SND1Q7KZF4 XRCC5-204ENST00000429133 576 ntTSL 414.66□□□□□ -0.065e-6■■□□□ 12.9
SND1Q7KZF4 SLC5A6-216ENST00000481751 615 ntTSL 213.3□□□□□ -0.282e-6■■□□□ 12.9
SND1Q7KZF4 XRCC5-203ENST00000417391 605 ntTSL 310.62□□□□□ -0.715e-6■■□□□ 12.9
SND1Q7KZF4 XRCC5-208ENST00000476360 610 ntTSL 29.49□□□□□ -0.895e-6■■□□□ 12.9
SND1Q7KZF4 XRCC5-205ENST00000451695 415 ntTSL 53.64□□□□□ -1.835e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.081e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC13.12□□□□□ -0.311e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-209ENST00000485420 2906 ntTSL 513.06□□□□□ -0.321e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.341e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-210ENST00000494718 5418 ntTSL 211.79□□□□□ -0.521e-6■■□□□ 12.9
SND1Q7KZF4 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.721e-6■■□□□ 12.9
SND1Q7KZF4 P4HB-206ENST00000471535 579 ntTSL 424.57■■□□□ 1.521e-24■■□□□ 12.9
SND1Q7KZF4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.15□□□□□ -0.142e-20■■□□□ 12.9
SND1Q7KZF4 THBS1-208ENST00000560894 537 ntTSL 27.84□□□□□ -1.155e-9■■□□□ 12.8
SND1Q7KZF4 SYVN1-214ENST00000532771 709 ntTSL 39.8□□□□□ -0.847e-7■■□□□ 12.8
SND1Q7KZF4 SYVN1-213ENST00000531018 826 ntTSL 39.49□□□□□ -0.897e-7■■□□□ 12.8
SND1Q7KZF4 TMEM214-206ENST00000435172 1480 ntTSL 516.19■□□□□ 0.183e-10■■□□□ 12.8
SND1Q7KZF4 FKBP10-205ENST00000487489 578 ntTSL 218.11■□□□□ 0.493e-25■■□□□ 12.8
Retrieved 100 of 13,567 protein–RNA pairs in 90.3 ms