RNA–Protein interactions for RNA: ENST00000560894.1

THBS1-208, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-208ENST00000560894 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
THBS1-208ENST00000560894 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
THBS1-208ENST00000560894 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
THBS1-208ENST00000560894 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
THBS1-208ENST00000560894 FOXD1Q16676 465 aa16.85■□□□□ 0.29
THBS1-208ENST00000560894 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
THBS1-208ENST00000560894 MSH5O43196 834 aa15.94■□□□□ 0.14
THBS1-208ENST00000560894 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
THBS1-208ENST00000560894 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
THBS1-208ENST00000560894 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
THBS1-208ENST00000560894 ADRA2BP18089 450 aa15.35■□□□□ 0.05
THBS1-208ENST00000560894 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
THBS1-208ENST00000560894 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
THBS1-208ENST00000560894 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
THBS1-208ENST00000560894 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
THBS1-208ENST00000560894 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
THBS1-208ENST00000560894 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
THBS1-208ENST00000560894 KCNA4P22459 653 aa13.57□□□□□ -0.24
THBS1-208ENST00000560894 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
THBS1-208ENST00000560894 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
THBS1-208ENST00000560894 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
THBS1-208ENST00000560894 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
THBS1-208ENST00000560894 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
THBS1-208ENST00000560894 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
THBS1-208ENST00000560894 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
THBS1-208ENST00000560894 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
THBS1-208ENST00000560894 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
THBS1-208ENST00000560894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
THBS1-208ENST00000560894 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
THBS1-208ENST00000560894 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
THBS1-208ENST00000560894 POTEHQ6S545 545 aa12.62□□□□□ -0.39
THBS1-208ENST00000560894 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
THBS1-208ENST00000560894 DSG3P32926 999 aa12.57□□□□□ -0.4
THBS1-208ENST00000560894 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
THBS1-208ENST00000560894 CAPN15O75808 1086 aa12.49□□□□□ -0.41
THBS1-208ENST00000560894 ZBTB22O15209 634 aa12.46□□□□□ -0.41
THBS1-208ENST00000560894 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
THBS1-208ENST00000560894 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
THBS1-208ENST00000560894 APLP2Q06481 763 aa12.24□□□□□ -0.45
THBS1-208ENST00000560894 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
THBS1-208ENST00000560894 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
THBS1-208ENST00000560894 ABCB7O75027 752 aa12.15□□□□□ -0.46
THBS1-208ENST00000560894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
THBS1-208ENST00000560894 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
THBS1-208ENST00000560894 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
THBS1-208ENST00000560894 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
THBS1-208ENST00000560894 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
THBS1-208ENST00000560894 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
THBS1-208ENST00000560894 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
THBS1-208ENST00000560894 POLA2Q14181 598 aa11.8□□□□□ -0.52
THBS1-208ENST00000560894 FKBP8Q14318 412 aa11.66□□□□□ -0.54
THBS1-208ENST00000560894 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
THBS1-208ENST00000560894 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
THBS1-208ENST00000560894 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
THBS1-208ENST00000560894 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
THBS1-208ENST00000560894 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
THBS1-208ENST00000560894 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
THBS1-208ENST00000560894 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
THBS1-208ENST00000560894 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
THBS1-208ENST00000560894 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
THBS1-208ENST00000560894 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
THBS1-208ENST00000560894 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
THBS1-208ENST00000560894 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
THBS1-208ENST00000560894 HAX1O00165 279 aa11.38□□□□□ -0.59
THBS1-208ENST00000560894 EVX2Q03828 476 aa11.22□□□□□ -0.61
THBS1-208ENST00000560894 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
THBS1-208ENST00000560894 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
THBS1-208ENST00000560894 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
THBS1-208ENST00000560894 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
THBS1-208ENST00000560894 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
THBS1-208ENST00000560894 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
THBS1-208ENST00000560894 FBLN2P98095 1184 aa11.09□□□□□ -0.63
THBS1-208ENST00000560894 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
THBS1-208ENST00000560894 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
THBS1-208ENST00000560894 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
THBS1-208ENST00000560894 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
THBS1-208ENST00000560894 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
THBS1-208ENST00000560894 GABBR2O75899 941 aa10.97□□□□□ -0.65
THBS1-208ENST00000560894 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
THBS1-208ENST00000560894 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
THBS1-208ENST00000560894 LHX8Q68G74 356 aa10.91□□□□□ -0.66
THBS1-208ENST00000560894 PROM2Q8N271 834 aa10.91□□□□□ -0.66
THBS1-208ENST00000560894 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
THBS1-208ENST00000560894 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
THBS1-208ENST00000560894 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
THBS1-208ENST00000560894 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
THBS1-208ENST00000560894 IFNLR1Q8IU57 520 aaPredicted RBP10.77□□□□□ -0.69
THBS1-208ENST00000560894 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
THBS1-208ENST00000560894 CLCN6P51797 869 aa10.73□□□□□ -0.69
THBS1-208ENST00000560894 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
THBS1-208ENST00000560894 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
THBS1-208ENST00000560894 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
THBS1-208ENST00000560894 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
THBS1-208ENST00000560894 PKD2Q13563 968 aa10.62□□□□□ -0.71
THBS1-208ENST00000560894 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
THBS1-208ENST00000560894 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
THBS1-208ENST00000560894 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
THBS1-208ENST00000560894 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
THBS1-208ENST00000560894 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
THBS1-208ENST00000560894 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms