RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
CEACAM1-201ENST00000161559 AEBP2Q6ZN18 517 aaPredicted RBP10.86□□□□□ -0.67
CEACAM1-201ENST00000161559 CHIC1Q5VXU3 224 aa10.52□□□□□ -0.73
CEACAM1-201ENST00000161559 SHROOM4Q9ULL8 1493 aa10.24□□□□□ -0.77
CEACAM1-201ENST00000161559 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
CEACAM1-201ENST00000161559 MYO15BQ96JP2 1530 aa9.94□□□□□ -0.82
CEACAM1-201ENST00000161559 PPARGC1BQ86YN6 1023 aaKnown RBP9.91□□□□□ -0.82
CEACAM1-201ENST00000161559 HRCP23327 699 aa9.87□□□□□ -0.83
CEACAM1-201ENST00000161559 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
CEACAM1-201ENST00000161559 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
CEACAM1-201ENST00000161559 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
CEACAM1-201ENST00000161559 ZCCHC6Q5VYS8 1495 aaKnown RBP9.64□□□□□ -0.87
CEACAM1-201ENST00000161559 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
CEACAM1-201ENST00000161559 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
CEACAM1-201ENST00000161559 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
CEACAM1-201ENST00000161559 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-201ENST00000161559 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
CEACAM1-201ENST00000161559 SCAF1Q9H7N4 1312 aaKnown RBP9.38□□□□□ -0.91
CEACAM1-201ENST00000161559 ABCC9O60706 1549 aa9.34□□□□□ -0.91
CEACAM1-201ENST00000161559 PHF23Q9BUL5 403 aaPredicted RBP9.29□□□□□ -0.92
CEACAM1-201ENST00000161559 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
CEACAM1-201ENST00000161559 TTBK1Q5TCY1 1321 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-201ENST00000161559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-201ENST00000161559 SENP3Q9H4L4 574 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-201ENST00000161559 RB1CC1Q8TDY2 1594 aa9.18□□□□□ -0.94
CEACAM1-201ENST00000161559 NEUROD1Q13562 356 aa9.16□□□□□ -0.94
CEACAM1-201ENST00000161559 RSF1Q96T23 1441 aaPredicted RBP9.15□□□□□ -0.94
CEACAM1-201ENST00000161559 SCRIBQ14160 1630 aa9.15□□□□□ -0.95
CEACAM1-201ENST00000161559 ZEB1P37275 1124 aaPredicted RBP9.14□□□□□ -0.95
CEACAM1-201ENST00000161559 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
CEACAM1-201ENST00000161559 CCER1Q8TC90 406 aaPredicted RBP9.07□□□□□ -0.96
CEACAM1-201ENST00000161559 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
CEACAM1-201ENST00000161559 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
CEACAM1-201ENST00000161559 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.96
CEACAM1-201ENST00000161559 DIEXFQ68CQ4 756 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-201ENST00000161559 YTHDC1Q96MU7 727 aaKnown RBP9□□□□□ -0.97
CEACAM1-201ENST00000161559 MROH2BQ7Z745 1585 aa8.96□□□□□ -0.98
CEACAM1-201ENST00000161559 WIZO95785 1651 aa8.95□□□□□ -0.98
CEACAM1-201ENST00000161559 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
CEACAM1-201ENST00000161559 ABCC8Q09428 1581 aa8.9□□□□□ -0.98
CEACAM1-201ENST00000161559 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
CEACAM1-201ENST00000161559 CENPBP07199 599 aaPredicted RBP8.87□□□□□ -0.99
CEACAM1-201ENST00000161559 MIER1Q8N108 512 aa8.86□□□□□ -0.99
CEACAM1-201ENST00000161559 SOGA1O94964 1423 aa8.85□□□□□ -0.99
CEACAM1-201ENST00000161559 RUSC2Q8N2Y8 1516 aa8.85□□□□□ -0.99
CEACAM1-201ENST00000161559 HNRNPUL2Q1KMD3 747 aaKnown RBP8.83□□□□□ -1
CEACAM1-201ENST00000161559 CEP162Q5TB80 1403 aa8.83□□□□□ -1
CEACAM1-201ENST00000161559 NACADO15069 1562 aa8.82□□□□□ -1
CEACAM1-201ENST00000161559 EIF4G1Q04637 1599 aaKnown RBP8.82□□□□□ -1
CEACAM1-201ENST00000161559 ZNF316A6NFI3 1004 aaPredicted RBP8.81□□□□□ -1
CEACAM1-201ENST00000161559 RANGAP1P46060 587 aaPredicted RBP8.8□□□□□ -1
CEACAM1-201ENST00000161559 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
CEACAM1-201ENST00000161559 BAZ1AQ9NRL2 1556 aaPredicted RBP8.75□□□□□ -1.01
CEACAM1-201ENST00000161559 WRNQ14191 1432 aaPredicted RBP eCLIP8.74□□□□□ -1.01
CEACAM1-201ENST00000161559 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
CEACAM1-201ENST00000161559 TNIKQ9UKE5 1360 aa8.69□□□□□ -1.02
CEACAM1-201ENST00000161559 SMARCA2P51531 1590 aa8.68□□□□□ -1.02
CEACAM1-201ENST00000161559 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
CEACAM1-201ENST00000161559 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-201ENST00000161559 PLPPR3Q6T4P5 718 aa8.63□□□□□ -1.03
CEACAM1-201ENST00000161559 SUPT16HQ9Y5B9 1047 aaKnown RBP8.63□□□□□ -1.03
CEACAM1-201ENST00000161559 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
CEACAM1-201ENST00000161559 GOLGA3Q08378 1498 aa8.61□□□□□ -1.03
CEACAM1-201ENST00000161559 CLIP1P30622 1438 aa8.6□□□□□ -1.03
CEACAM1-201ENST00000161559 FOXD1Q16676 465 aa8.59□□□□□ -1.03
CEACAM1-201ENST00000161559 BCANQ96GW7 911 aa8.59□□□□□ -1.03
CEACAM1-201ENST00000161559 SYNJ1O43426 1573 aa8.59□□□□□ -1.03
CEACAM1-201ENST00000161559 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
CEACAM1-201ENST00000161559 MYT1Q01538 1121 aa8.58□□□□□ -1.04
CEACAM1-201ENST00000161559 ITGAEP38570 1179 aa8.57□□□□□ -1.04
CEACAM1-201ENST00000161559 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
CEACAM1-201ENST00000161559 TSHZ2Q9NRE2 1034 aa8.57□□□□□ -1.04
CEACAM1-201ENST00000161559 UNC13AQ9UPW8 1703 aa8.55□□□□□ -1.04
CEACAM1-201ENST00000161559 DHX57Q6P158 1386 aaKnown RBP8.55□□□□□ -1.04
CEACAM1-201ENST00000161559 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
CEACAM1-201ENST00000161559 APLP2Q06481 763 aa8.53□□□□□ -1.04
CEACAM1-201ENST00000161559 KIF21BO75037 1637 aa8.52□□□□□ -1.05
CEACAM1-201ENST00000161559 CEP164Q9UPV0 1460 aa8.51□□□□□ -1.05
CEACAM1-201ENST00000161559 EEA1Q15075 1411 aa8.51□□□□□ -1.05
CEACAM1-201ENST00000161559 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
CEACAM1-201ENST00000161559 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
CEACAM1-201ENST00000161559 FKBP8Q14318 412 aa8.45□□□□□ -1.06
CEACAM1-201ENST00000161559 ANP32EQ9BTT0 268 aa8.44□□□□□ -1.06
CEACAM1-201ENST00000161559 DDX10Q13206 875 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-201ENST00000161559 ADRA2BP18089 450 aa8.43□□□□□ -1.06
CEACAM1-201ENST00000161559 TRIM52Q96A61 297 aa8.43□□□□□ -1.06
CEACAM1-201ENST00000161559 SIN3AQ96ST3 1273 aa8.43□□□□□ -1.06
CEACAM1-201ENST00000161559 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
CEACAM1-201ENST00000161559 BICRAQ9NZM4 1560 aa8.4□□□□□ -1.07
CEACAM1-201ENST00000161559 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
CEACAM1-201ENST00000161559 MAPKBP1O60336 1514 aa8.38□□□□□ -1.07
CEACAM1-201ENST00000161559 WDR97A6NE52 1622 aa8.38□□□□□ -1.07
CEACAM1-201ENST00000161559 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CEACAM1-201ENST00000161559 IRX6P78412 446 aaPredicted RBP8.38□□□□□ -1.07
CEACAM1-201ENST00000161559 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
CEACAM1-201ENST00000161559 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
CEACAM1-201ENST00000161559 RRBP1Q9P2E9 1410 aaKnown RBP8.35□□□□□ -1.07
CEACAM1-201ENST00000161559 MSH5O43196 834 aa8.35□□□□□ -1.07
CEACAM1-201ENST00000161559 ATAD2BQ9ULI0 1458 aa8.35□□□□□ -1.07
CEACAM1-201ENST00000161559 CLSPNQ9HAW4 1339 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms